| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5380 |
|---|
| Symbol | |
|---|
| ID | 6279349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1568340 |
|---|
| End bp | 1570091 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642616466 |
|---|
| Product | FAD-dependent oxidoreductase |
|---|
| Protein accession | YP_001889109 |
|---|
| Protein GI | 187920078 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.189642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0809664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC CCTTCAAACC CTATCCGTTT TCACCGCGTC ACTATGAAGG CGTGGCGCCA
CCGCTCGTCG ACGGACGCGA TCCTGTCAGG CGGCCGGTGG CGATTGTTGG CGGCGGGCCG
GTCGGCATGA CGCTGGCGCT CGCGCTGGCT CGCCAGGACG TGCGCTCGGT GCTGATCGAA
GCCGACGACA GCGTGTGCAC CGGCAGCCGC GCGATCTGCA TCTCGCGGCG CAGCCTGGAA
ATCTTCAAGC GACTCGGCGT CGTGCAAGGC TTCCTGCAAA AAGGCTTGCC GTGGACGGGC
GGCCGCAGCT TCTACCGCGA TGCCGAAGTG TTCCGCTTCG CCATGCATCA GGACGACGAG
CAATCGCTGC CGCCCATGAT CAACATCGCG CAATATCAGA TCGAACAGTT GCTGCTCGAC
GAAGTGGAAC GGCATGCCGA TCTGATCGAG ATCCGCTGGC AGACGCGCGT GACCGGCATC
GAACAGCACG CGGCTGAAGG CGATCGCGGG AACCGGGAAG GCACGGCCGG CGCGACGCTC
GCCCTGCGCA CCGGCGACAC GGCCTGGCAG ATGAACGCCG ACTGGGTCGT CGCCTGCGAC
GGCGGCCGCA GCACGATTCG CGAGGCGCTC GGTCTCAAGC TCACCGGCAC CACTTACGAA
GGCCGCTACG TGATCGTGGA TATCGAACTG GACAGCGCGC GCGCCACCGA GCGCCTTGCC
TATTTCGATC CGCCGTCCAA TCCCGGCTCG ACGGTGCTGG TGCACAAGCA GCCCGACAAC
GTCTGGCGCA TCGACTACCA GCTTCGCGAC GACGAAGACC CGGAAGCCGC CGTGCAGCCC
GAGAACGTCA TGCCACGCGT GCAGAGCGTG CTCGATTCGA TGGGCGAAAC CGGCGCATGG
TCGCCGATCT GGATCACCGT CTACAAGGCC AACGCATTGA CGCTCGAACG CTACCGGCAC
GGCCCGGTGC TGTTCGCGGG CGACGCCGCG CATCTCGTGC CGATCTTCGG CGTGCGCGGC
GCCAACTCCG GTATCGACGA CGCGGACAAC CTCGGCTGGA AACTGGGCTG CGTGGTGAAC
GGAGCTGCGT CGCCGCGTCT GCTCGATAGC TACAGCGACG AGCGGGTGTT CGCGGCACGC
GAGAACCTGA GTTACGGCAT GAAGAGCACG GAGTTCATGG CGCCGCCCTC GTTCGCCTTC
GATCTGATGC GCCAGGCGGT GCTCGGTCTC GCGGAGCATC ATGCGGCGGT GCGTCCGTTG
ATCAATCCGC GGCAGACGCA TGCGATTGCC TATGTGCAGT CGCCGCTCAA CCAGGCCGCT
GGCGACGCGA GCGATGCTTT CGCGCAAGGC CCAGCGCCCG GTACTGTGCT TCCGGAATGC
CGACTCAAAC GCAGGGACGC AGGCGTCTTT CACGATATCC ATCTGACGGA TCTGCTCGGG
CCATGCTTCA CTGCATTGCG CTTCGGTGCG AACGCGAACG ACGATTCCGC GCAAGACGCA
GCGTGGCAGC AGTTGCAAGA CACGCTGGCC GGACAACATA TCCCGTTCAA AACCGTCAAG
CTGGTCAGGA ACGACACGCA TAGCGTCACC AGCTCAAACG TGGTCGATCA CACCGGCCGT
CTTCACGACA TGCTCGACGC GACGCCCGGC ACGGTCTATC TGATTCGTCC CGATGGCCAT
GTACTGGCCC GCTGGCGCGA CGGCAGCGCG GAGGCCACGC AGCGCGCCAT CCGCGCGGCG
CTGACGATCT AA
|
|---|
| Protein sequence | MSRPFKPYPF SPRHYEGVAP PLVDGRDPVR RPVAIVGGGP VGMTLALALA RQDVRSVLIE
ADDSVCTGSR AICISRRSLE IFKRLGVVQG FLQKGLPWTG GRSFYRDAEV FRFAMHQDDE
QSLPPMINIA QYQIEQLLLD EVERHADLIE IRWQTRVTGI EQHAAEGDRG NREGTAGATL
ALRTGDTAWQ MNADWVVACD GGRSTIREAL GLKLTGTTYE GRYVIVDIEL DSARATERLA
YFDPPSNPGS TVLVHKQPDN VWRIDYQLRD DEDPEAAVQP ENVMPRVQSV LDSMGETGAW
SPIWITVYKA NALTLERYRH GPVLFAGDAA HLVPIFGVRG ANSGIDDADN LGWKLGCVVN
GAASPRLLDS YSDERVFAAR ENLSYGMKST EFMAPPSFAF DLMRQAVLGL AEHHAAVRPL
INPRQTHAIA YVQSPLNQAA GDASDAFAQG PAPGTVLPEC RLKRRDAGVF HDIHLTDLLG
PCFTALRFGA NANDDSAQDA AWQQLQDTLA GQHIPFKTVK LVRNDTHSVT SSNVVDHTGR
LHDMLDATPG TVYLIRPDGH VLARWRDGSA EATQRAIRAA LTI
|
|---|
| |