| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5379 |
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| Symbol | |
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| ID | 6279205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1566225 |
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| End bp | 1568177 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616465 |
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| Product | protein of unknown function UPF0118 |
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| Protein accession | YP_001889108 |
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| Protein GI | 187920077 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.613329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.237029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCT CGTTACCGCC GTCTGGGCGG CCGAACCGCG TTTACCCGCC GGGCACGCCG
AGTCTGCACG GCCTTGCGTC GGTGATTACC GGCGTGGTGG TGGTGTGCGG CCTGTACTTC
GGCCGCGCGG TGTTGATCCC GATCACGCTG TCGGTCTTGC TCAGTTTCCT GCTCGCTCCG
CTCGTACAGA TGTTGCGGCG TTTCCATATG GGGCAGTTGC CGTCCATCTT CATCGCGGTG
TTGTTCGCGT TGGCCAGCTT GCTCGCCGTC GGTGCGCTGA TCACCGCGCA ACTCGTGCAA
CTCGCTGCCG ACCTGCCGCA GTATCAGGAG GCGATCGAGC AGAAGATCGA GACGGTGCAG
GAAAAAACCG TCGGCCGCGC CGATTCGCTG ATGAGCCGCG CCGCCGTCGC GTTGCAACGC
GTGTCTCCGC CCAAGCCGAA CCCGCCCCGT CCGACCGGAC GCGCCGCGCG CAATGCGCCC
GCCGTGCCGC AGCCGGTCGA AGTGCACGAA CCCGCGCCCA CGCCGATGCA GCTCGCGCAG
CGCGCGTTGT CGCCGGCCAT CGCGCCGATC GAAACGACCT TCATCGTGCT GGTCGTGACG
ATCTTTATCC TGCTGCAACG CGAGGATTTG CGCGACCGTT TGATCAGCCT GTTCGGCTCG
CGCGATCTGC ATCGCACCAC CACTGCGATC AATGACGCTG CCGTGCGGCT GTCTCGCTAC
TTCGTCGCGC AACTCGGTGT AAACCTGAGT GCGGGTGGCG TGATCGCCAT CGGGCTCGCG
ATCATCGGCG TGCCGGGTGC GCTGCTGTTC GGCGTGATCG CCGCGTTGCT GCGCTTCGTG
CCGTACATCG GCATCTGGAT CGCCGCGATT CTCGCCGTGT TCCTCGCGGC CGCGATCCAG
CCGCAATGGA CCATGGCGGT TTATACGCTG ATCCTGTTCA TCGTCGTCGA CGTGGTGGCC
GGGCAGATCG CCGAGCCGCT GCTGTATGGC CACCGCTCCG GCCTGTCGCC GCTCGCGGTA
GTGGTGGCGG CGATTTTCTG GAGCTGGCTG TGGGGGCCGA TCGGCCTCGT GCTGTCGACG
CCGCTCACGT TGTGCGTGGT CACGCTGGGC CGCTACGCCG ACCGGCTGAA CTTTCTCACG
GTGCTGCTGG GCGATCAGCC CGCGCTCACG CCCGCGCAGA ACTTCTATCA GCGGCTGCTC
GCGGACGATC CGCATGAGGC CATCGTGCAG GCGGAGCGCC TGTTGCGCGA GATGTCGCTG
ATCGACTACT ACGACAAGGT CGCGCTCGAA GGCCTCAAGC TCGCCCGCAA CGATGCCATG
CGCGGCGTGC TGATGCCGGA CCAGTTGCAG CGCATCAACG ACGCGCTGGT GGACATCGTC
GAAAACCTGG AAATCGCGGA CGGCTTGCCG GACCGCATGG CGCGCAGCGA GCCCGCCGAT
ACCGCGAGCG CGCTGCTCGC TTCGGCCTCG GCCGATCTGT CCGAGCGGCA CGACAGCCAC
ATTGCTGCGC ACCCGCAGCT GCGCCGTGAA GCGGAAAAAA CCTCCGTGCT GTGCGTACCC
GGGCGCGGTT CGTTCGACGA AGTCACCACT GCAATCGCCG TGCAACTGCT CAGCCGCCAG
GGCCTCGCGC CAATGATGGC GACGCACTCG GGCTATCGCA GCGCACGCGC CGACGAACCG
AGCTTCAAGG ACGCACCGAT CATCTGCATC GTCTCGCTCG ATGCGCCAGA GTCGCCGCCG
TATCTGCGCA ACATGCTGCG GCGCACGCGC GAATGGCGGC CGCGGGCGAC GCTGGTGGTC
GGCGTCGGCG GCGCGCCGGA AGGCGGCCCG GAAATGGGCG CGACCGGCGC TTCGCACGCG
GCGCCCACCT TCCGCGCAAT GATCGAGGAA TGCCTCGCCG CGTCGAGCTT GCCGCACGCG
CGCCACGCTT CGCATGTGGG CGGAGCGGAC TAG
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| Protein sequence | MKISLPPSGR PNRVYPPGTP SLHGLASVIT GVVVVCGLYF GRAVLIPITL SVLLSFLLAP
LVQMLRRFHM GQLPSIFIAV LFALASLLAV GALITAQLVQ LAADLPQYQE AIEQKIETVQ
EKTVGRADSL MSRAAVALQR VSPPKPNPPR PTGRAARNAP AVPQPVEVHE PAPTPMQLAQ
RALSPAIAPI ETTFIVLVVT IFILLQREDL RDRLISLFGS RDLHRTTTAI NDAAVRLSRY
FVAQLGVNLS AGGVIAIGLA IIGVPGALLF GVIAALLRFV PYIGIWIAAI LAVFLAAAIQ
PQWTMAVYTL ILFIVVDVVA GQIAEPLLYG HRSGLSPLAV VVAAIFWSWL WGPIGLVLST
PLTLCVVTLG RYADRLNFLT VLLGDQPALT PAQNFYQRLL ADDPHEAIVQ AERLLREMSL
IDYYDKVALE GLKLARNDAM RGVLMPDQLQ RINDALVDIV ENLEIADGLP DRMARSEPAD
TASALLASAS ADLSERHDSH IAAHPQLRRE AEKTSVLCVP GRGSFDEVTT AIAVQLLSRQ
GLAPMMATHS GYRSARADEP SFKDAPIICI VSLDAPESPP YLRNMLRRTR EWRPRATLVV
GVGGAPEGGP EMGATGASHA APTFRAMIEE CLAASSLPHA RHASHVGGAD
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