Gene Bphyt_5377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5377 
Symbol 
ID6280042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1563428 
End bp1564570 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID642616463 
Productmetallophosphoesterase 
Protein accessionYP_001889106 
Protein GI187920075 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.31329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGT TTCTGCACAC CGCGGACTGG CAGATCGGCA CGCAATTCGG CCAGTTCGAG 
CCGGACGAGG CGGCGCATCT TGCCGAGGCG CGCTTCGAGA CCGTACGCCG GATCGCCGGA
GAAGCCGCCG CGCGCAATGT CGATGCGGTG CTCGTGGCCG GGGACGTCTT CGATCTGCAA
ACCGTCTCCG ACACGGTGAT CCGCCGTTTG TTCGGCGCGC TGCAAGCGTT CGCGGGGCCG
TGGATCATGT TGCCGGGCAA TCACGATGCC GCGCTCGTCG AGAGCGTGTG GACGCGCGCG
CAGCGCCTGA ACTGCATCGC GCCGAATGTG CGCGTGGTGC TCGAACCCGG TGTCGTGCTG
CTGGACGACT GCCGGTGCGC GCTGCTGTGC GCGCCGCTCA CGCAACGCAT CACGTATGAC
GACACCACCG GTTTCTTCGA CAGTGCGGAG ACGCCGCCTG GCTATCACCG CGTCGGGCTC
GCACACGGCA GCGTGAGCGG AATTTTGCAG GAAGGCATCG ACTCGTCGAA TCCTATCGCG
CCGACGCGTG CCGGGAGCGC GCGTCTGGAT TATCTGGCGC TCGGCGACTG GCATGGGCAT
CTGCGTGTCG ATGAGCGCGT CTGGTACGCG GGCACGCACG AACAGGACCG CTTCCGCGCC
AACGATCCGG GCTTCATGCT CGATGTCACG TTGAGCGAGC CGGGCGCCTC GCCGGTGGTC
GAGCCGGTGC GGGTCGGTCA ATATCAATGG CATCGGTGGG AGGAAACCAT CGCCGTGCCG
ACCGATGTGG ATTCGCTCAA GGCGCGCCTC GCCACGCTAG GCAGCCACGA TGTGTTGCGC
GTGACGGTCG GCGGCACGGC AGCGCTCGCC GACGCCGAAG CGCTTCACGT CGCGGTGGAA
GAAGCCCGCG CGCGCGTGCG AGCCTTGCGC GTCGACCTGA GCGGCCTGCA AGTGCTGCCC
ACCGACGACG ATCTCGCCGA ACTCGGCGCG CAAAGCGGCT ACCTCGCGAA AGTGGTGGCG
CGTCTGCGTG GCTTGCAGGA AGACCCGCAG TCCGACCCGC AAGAGATCAA GCGCGCGGCC
GAGGCATTGC TGCTTCTGGC GCGTTTTCAA CGTGAATTGC CGCGCGAAGC GAGGTCCGCA
TGA
 
Protein sequence
MIRFLHTADW QIGTQFGQFE PDEAAHLAEA RFETVRRIAG EAAARNVDAV LVAGDVFDLQ 
TVSDTVIRRL FGALQAFAGP WIMLPGNHDA ALVESVWTRA QRLNCIAPNV RVVLEPGVVL
LDDCRCALLC APLTQRITYD DTTGFFDSAE TPPGYHRVGL AHGSVSGILQ EGIDSSNPIA
PTRAGSARLD YLALGDWHGH LRVDERVWYA GTHEQDRFRA NDPGFMLDVT LSEPGASPVV
EPVRVGQYQW HRWEETIAVP TDVDSLKARL ATLGSHDVLR VTVGGTAALA DAEALHVAVE
EARARVRALR VDLSGLQVLP TDDDLAELGA QSGYLAKVVA RLRGLQEDPQ SDPQEIKRAA
EALLLLARFQ RELPREARSA