Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5377 |
Symbol | |
ID | 6280042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1563428 |
End bp | 1564570 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642616463 |
Product | metallophosphoesterase |
Protein accession | YP_001889106 |
Protein GI | 187920075 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.31329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAGGT TTCTGCACAC CGCGGACTGG CAGATCGGCA CGCAATTCGG CCAGTTCGAG CCGGACGAGG CGGCGCATCT TGCCGAGGCG CGCTTCGAGA CCGTACGCCG GATCGCCGGA GAAGCCGCCG CGCGCAATGT CGATGCGGTG CTCGTGGCCG GGGACGTCTT CGATCTGCAA ACCGTCTCCG ACACGGTGAT CCGCCGTTTG TTCGGCGCGC TGCAAGCGTT CGCGGGGCCG TGGATCATGT TGCCGGGCAA TCACGATGCC GCGCTCGTCG AGAGCGTGTG GACGCGCGCG CAGCGCCTGA ACTGCATCGC GCCGAATGTG CGCGTGGTGC TCGAACCCGG TGTCGTGCTG CTGGACGACT GCCGGTGCGC GCTGCTGTGC GCGCCGCTCA CGCAACGCAT CACGTATGAC GACACCACCG GTTTCTTCGA CAGTGCGGAG ACGCCGCCTG GCTATCACCG CGTCGGGCTC GCACACGGCA GCGTGAGCGG AATTTTGCAG GAAGGCATCG ACTCGTCGAA TCCTATCGCG CCGACGCGTG CCGGGAGCGC GCGTCTGGAT TATCTGGCGC TCGGCGACTG GCATGGGCAT CTGCGTGTCG ATGAGCGCGT CTGGTACGCG GGCACGCACG AACAGGACCG CTTCCGCGCC AACGATCCGG GCTTCATGCT CGATGTCACG TTGAGCGAGC CGGGCGCCTC GCCGGTGGTC GAGCCGGTGC GGGTCGGTCA ATATCAATGG CATCGGTGGG AGGAAACCAT CGCCGTGCCG ACCGATGTGG ATTCGCTCAA GGCGCGCCTC GCCACGCTAG GCAGCCACGA TGTGTTGCGC GTGACGGTCG GCGGCACGGC AGCGCTCGCC GACGCCGAAG CGCTTCACGT CGCGGTGGAA GAAGCCCGCG CGCGCGTGCG AGCCTTGCGC GTCGACCTGA GCGGCCTGCA AGTGCTGCCC ACCGACGACG ATCTCGCCGA ACTCGGCGCG CAAAGCGGCT ACCTCGCGAA AGTGGTGGCG CGTCTGCGTG GCTTGCAGGA AGACCCGCAG TCCGACCCGC AAGAGATCAA GCGCGCGGCC GAGGCATTGC TGCTTCTGGC GCGTTTTCAA CGTGAATTGC CGCGCGAAGC GAGGTCCGCA TGA
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Protein sequence | MIRFLHTADW QIGTQFGQFE PDEAAHLAEA RFETVRRIAG EAAARNVDAV LVAGDVFDLQ TVSDTVIRRL FGALQAFAGP WIMLPGNHDA ALVESVWTRA QRLNCIAPNV RVVLEPGVVL LDDCRCALLC APLTQRITYD DTTGFFDSAE TPPGYHRVGL AHGSVSGILQ EGIDSSNPIA PTRAGSARLD YLALGDWHGH LRVDERVWYA GTHEQDRFRA NDPGFMLDVT LSEPGASPVV EPVRVGQYQW HRWEETIAVP TDVDSLKARL ATLGSHDVLR VTVGGTAALA DAEALHVAVE EARARVRALR VDLSGLQVLP TDDDLAELGA QSGYLAKVVA RLRGLQEDPQ SDPQEIKRAA EALLLLARFQ RELPREARSA
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