Gene Bphyt_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5279 
Symbol 
ID6280496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1457502 
End bp1458038 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID642616365 
Producthypothetical protein 
Protein accessionYP_001889008 
Protein GI187919977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.40755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATG CAGTCGCTCC ACGCCGTTCC GCCGGGTTGT CCGGCCCGCT GCTGCGCAAC 
CTGGCCGGCG CGGCGCTGGC CGTGTCGCTC GGCAGTGCGC CGCTTGCATA TGGCGCGGAC
CCGAGCGCAG CGCCAAACGC CGGCATGACC GGCTCACCCG GCGCGTCGAG CACCGCCGGG
GCGGCAGCGT CCCCACCGGC AGCACCGGCG GCATCGGCGG CGTCCGCACC CGACGACACC
TTCCTGCTCA CCATCTTCCT GCGCCACGAC GAGTCCAAGC CGCTGCCGAA GATCAACGAC
CAGTTGCGCG CACAAGGTTT CTTCAAGACC TTTCCGCCGC CCGGCATCGA AGTGGTGTCG
TGGTACGTGA TGATGGGCAT CGGCCAAGTG GTCACGCTGC GCGTGCCCGC GAGCCGTCTG
CGCGAAGTCA ACCGGGCGAT CGAAACAACC GCATGGGGCG GCTATCGCAC TGAGTTTTAT
CCGACCTATG ACTACAAGGC GCAAGCGCAG CAAATGCGCG CAATGGACGG CAAATAG
 
Protein sequence
MPNAVAPRRS AGLSGPLLRN LAGAALAVSL GSAPLAYGAD PSAAPNAGMT GSPGASSTAG 
AAASPPAAPA ASAASAPDDT FLLTIFLRHD ESKPLPKIND QLRAQGFFKT FPPPGIEVVS
WYVMMGIGQV VTLRVPASRL REVNRAIETT AWGGYRTEFY PTYDYKAQAQ QMRAMDGK