Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5279 |
Symbol | |
ID | 6280496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1457502 |
End bp | 1458038 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642616365 |
Product | hypothetical protein |
Protein accession | YP_001889008 |
Protein GI | 187919977 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.40755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAATG CAGTCGCTCC ACGCCGTTCC GCCGGGTTGT CCGGCCCGCT GCTGCGCAAC CTGGCCGGCG CGGCGCTGGC CGTGTCGCTC GGCAGTGCGC CGCTTGCATA TGGCGCGGAC CCGAGCGCAG CGCCAAACGC CGGCATGACC GGCTCACCCG GCGCGTCGAG CACCGCCGGG GCGGCAGCGT CCCCACCGGC AGCACCGGCG GCATCGGCGG CGTCCGCACC CGACGACACC TTCCTGCTCA CCATCTTCCT GCGCCACGAC GAGTCCAAGC CGCTGCCGAA GATCAACGAC CAGTTGCGCG CACAAGGTTT CTTCAAGACC TTTCCGCCGC CCGGCATCGA AGTGGTGTCG TGGTACGTGA TGATGGGCAT CGGCCAAGTG GTCACGCTGC GCGTGCCCGC GAGCCGTCTG CGCGAAGTCA ACCGGGCGAT CGAAACAACC GCATGGGGCG GCTATCGCAC TGAGTTTTAT CCGACCTATG ACTACAAGGC GCAAGCGCAG CAAATGCGCG CAATGGACGG CAAATAG
|
Protein sequence | MPNAVAPRRS AGLSGPLLRN LAGAALAVSL GSAPLAYGAD PSAAPNAGMT GSPGASSTAG AAASPPAAPA ASAASAPDDT FLLTIFLRHD ESKPLPKIND QLRAQGFFKT FPPPGIEVVS WYVMMGIGQV VTLRVPASRL REVNRAIETT AWGGYRTEFY PTYDYKAQAQ QMRAMDGK
|
| |