| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5260 |
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| Symbol | |
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| ID | 6279878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1439904 |
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| End bp | 1441184 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616346 |
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| Product | Acyl-CoA dehydrogenase type 2 domain |
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| Protein accession | YP_001888989 |
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| Protein GI | 187919958 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.997637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.924081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG TTGAGCTAGC AACAAACCCG CATCACAGCA TTGCCGACGC CGCGCAACTC
TTCGGCGACA ACCCGCTGAT TCGCCGCTTT GCGCCGGTTT TCGCGCGTAT TGCTGAAGGC
GCGGTCGAGC GCGAGCAGCA TCGCGAACTC GCTTATGCGC CCGTCGAGTG GCTGCGCGAA
GCCGGCTATA CCAAACTGCG CGTGCCCAGA CAATACGGCG GCGAAGGCGT CTCGCTGGCA
CAGTTCTTCG CGCTGGTTAC GCGCCTCGGC GAAGCAGATT CGAATCTGCC GCAAATCCTG
CGCGTGCACG GCGGCTTTAT CGAATCGCTG CTGGAACAAG ACGACGAAGC GTTGCGCGAC
CGTTGGCTCA CACGTATTGC GCGAGGTGAG ATAGTCGGTG GCGCGGTGTC GGAGCGCACT
GGCGTCACCA GCAACAGCGT GCGTCTCACG CAAACCGGCG GTGCCTGGCA TCTCGACGGC
GAAAAGTACT ACACCACCGG CACGCTCTAC GCCGACTGGG TAGACGTCAC CGCGCACGAC
GGCCAGAGCG ATGTGCGCGT GCTCGTCAAA GCCGATACGC CAGGCCTCGA ACGCATCGAC
GATTGGGATG GTTTCGGACA ACGGCTCACG GGCAGCGGCA CGGCGCGCTT CACGCACGTG
CCGGTCTCGC TCGACAATCT TTACCGCCGC TATCATGCCT CCGAGCCGCG TCGCAATAGT
CTGCTGACGG CTTACTACCA GGCACTGCAT GTCGCAAACC TCGCGGGCAT CAGCCGCGCA
GCGTTGCGCG ATGCGGTCGC GTTCACGCAA ACTAAAACGC GCACCTTCGG TGTGCCGGGC
GAATCGAGTC CGCGCGACAA CCCGCTCGTG CATCGCGTGG TCGGGCGGCT CGCGAGCCTG
GCTTACTCGA CGCAGAGCAT CAGCGCGTCG CTCGCGCGTG CCATCGACGA CGTCTCGGTC
GCGCGCCAGG AAGGCCGCAC CAACGAACAG ACTTACATCA ACCTCGACAT TCAGACCTTC
CAGGCGCAAC AGATCGTCAT CGAGCAGACG TTGCAGGCGG CCACACTGCT GTTTGAAGTG
GGCGGCGCAT CGGCAACCAG CGAGACGCGC CGTTTCGACC GCTACTGGCG CAATGCACGC
GTGCTGGCGT CGCACAATCC CGCGATCATT CGCGAGGCCG CGATCGGTGA TTTTTACCTT
AACGGTAACG CGCACAGCGA GCGCTTCGGC GTGGCGCGAG AACAGGTGTT GGCAACCGAA
GCGGCCACGG CAACGGCATA A
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| Protein sequence | MSAVELATNP HHSIADAAQL FGDNPLIRRF APVFARIAEG AVEREQHREL AYAPVEWLRE
AGYTKLRVPR QYGGEGVSLA QFFALVTRLG EADSNLPQIL RVHGGFIESL LEQDDEALRD
RWLTRIARGE IVGGAVSERT GVTSNSVRLT QTGGAWHLDG EKYYTTGTLY ADWVDVTAHD
GQSDVRVLVK ADTPGLERID DWDGFGQRLT GSGTARFTHV PVSLDNLYRR YHASEPRRNS
LLTAYYQALH VANLAGISRA ALRDAVAFTQ TKTRTFGVPG ESSPRDNPLV HRVVGRLASL
AYSTQSISAS LARAIDDVSV ARQEGRTNEQ TYINLDIQTF QAQQIVIEQT LQAATLLFEV
GGASATSETR RFDRYWRNAR VLASHNPAII REAAIGDFYL NGNAHSERFG VAREQVLATE
AATATA
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