| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5249 |
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| Symbol | |
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| ID | 6279869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1427930 |
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| End bp | 1428907 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616335 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001888978 |
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| Protein GI | 187919947 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCG CCACGCTCAA AACTCTCGCG ACCTGCGTCG TCGCGCTCGC CGCATCCACC
AGTGCGATCC ATGCCGTCGC CGCCGATCCG CTGCGTGTCG GTGTGCTGAT TCCGGGTTCG
AAGTCGGACA AGGGCTGGAT GGAATCCGGT TACGACGGCC TCGTCGCGGC GCAGAAGGAA
CTCGGCCCGA AGCTCAAGAC GCAGATGATC GAGAACATCA ACTACGCCGA CATGGAGCAG
GCGCTGACCA ATCTCGCGTC GAAGAACCAG TTGGTGATCG GCGTCGGCGG GCAGACCCAG
GCGTCGGTGC TGAAGATCGC GAAGCGTTTT CCCAATGTGA AGTTCGCGAT CGTCGGCGGC
AACAAGGGGC AGGACATGCC GCCGAACGTG GCGGGCTATG ACGTCAAGCA GGCGGAGATC
GCCTACGTCG CCGGCGCGGC CGCGGCGATG CTGTCGAAGA ACGGCGCGGT GAGTTACGTG
GGCGGCATGG AGATTCCGTC CATCGTCAAC GCCGGCAAGG AGTTCGGCAA CGGCGCGCGC
TCCATCAATC CGAAGATCAA ATACTTCGAG AGCTACACCG GTGACTTCGA CAACGTGTCG
AAGGCCAAGG AAGCGACGCT CGCGGCGATC TCGCAAGGCG CGGACGTCCA CTATCACATT
CTCAATCTCG GCTTGCGCGG CATGGAGCAG GCGGCCAGCG AGAAGCACAC GCACGTGATC
GGCAGCTATA CGGACCGCTG CGGCACGGAC CCGCTGTATA TCGCGTATTC GATTACGGGC
GTCGGCTATC AGGTGCAATA CGCGATCGAC CAGATGGCGG CCGGCACCTG GCAGCCGGGC
TATAAGGCCT TCGGCCTGGC GATGGGACCG AAAGCGTCGG GCATGGTGGT GTGCTCGCCG
ACGCCGCAGA TGTCGACGAA GATCAAGCAG ATCGAACAGG ACATCGAAAG CGGCAAGATC
AAGGTCTCCG AAGGCTGA
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| Protein sequence | MSIATLKTLA TCVVALAAST SAIHAVAADP LRVGVLIPGS KSDKGWMESG YDGLVAAQKE
LGPKLKTQMI ENINYADMEQ ALTNLASKNQ LVIGVGGQTQ ASVLKIAKRF PNVKFAIVGG
NKGQDMPPNV AGYDVKQAEI AYVAGAAAAM LSKNGAVSYV GGMEIPSIVN AGKEFGNGAR
SINPKIKYFE SYTGDFDNVS KAKEATLAAI SQGADVHYHI LNLGLRGMEQ AASEKHTHVI
GSYTDRCGTD PLYIAYSITG VGYQVQYAID QMAAGTWQPG YKAFGLAMGP KASGMVVCSP
TPQMSTKIKQ IEQDIESGKI KVSEG
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