Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5238 |
Symbol | |
ID | 6278490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1415115 |
End bp | 1415810 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642616324 |
Product | isochorismatase hydrolase |
Protein accession | YP_001888967 |
Protein GI | 187919936 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.51684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGA CTAACACGCT GACCATCGAC GCCCAACCCG GCCCATTCAG CTTCGACTCC GCGAAAACGG CGCTGGTCGT GATCGACATG CAGCGCGATT TCATCGAGCC GGGCGGCTTC GGCGAATCGC TCGGCAACGA CGTCTCGCTG CTCGCGGACA TCGTGCCGAC AGTAGCCGCG TTGCTCGCCT TCGCGCGCAA GCACCACTGG TTCGTCGTGC ATACGCGTGA ATCGCACGCT CCAGATCTGT CCGACTGTCC GCCGGCCAAA CGTCTGCGCG GCGCGCCGAA TGCGCGCATC GGCGACGCCG GGCCGATGGG CCGCATTCTG ATTCGCGGCG AGCCCGGCAA TGCGATCGTC GAACCGCTCG CGCCGCTTGC CGGCGAACTG GTGATCGACA AACCCGGCAA GGGTGCGTTC CATGCGACCC GCCTCGGCGA AGAACTCGCG ATGCGCGGCG TCACGCATCT GGTGTTCGCC GGCGTGACCA CCGAAGTGTG CGTGCAAACA TCGATGCGCG AAGCCAACGA CCGCGGCTAC GACAGCCTGC TGATCGAGGA CGCCACCGCG AGCTATTTCC CCGCGTTCAA ACAGGCGACG CTCGAGATGG TGCGCTCGCA GGGCGGCATT GTCGGCTGGA CCGCGCCGTT TGCTTCATTG ATCAAAACCG ACGAGACGAC CCAGGCATGG AAATAA
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Protein sequence | MTSTNTLTID AQPGPFSFDS AKTALVVIDM QRDFIEPGGF GESLGNDVSL LADIVPTVAA LLAFARKHHW FVVHTRESHA PDLSDCPPAK RLRGAPNARI GDAGPMGRIL IRGEPGNAIV EPLAPLAGEL VIDKPGKGAF HATRLGEELA MRGVTHLVFA GVTTEVCVQT SMREANDRGY DSLLIEDATA SYFPAFKQAT LEMVRSQGGI VGWTAPFASL IKTDETTQAW K
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