| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5152 |
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| Symbol | |
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| ID | 6278176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1317239 |
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| End bp | 1318789 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642616240 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_001888883 |
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| Protein GI | 187919852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTAC TTACCATCGT GATTTTCATG ATCATTCTGG CGGTTACGCT GATGATCACT
TACTGGGCCG CACGCAGGAC ACGGACGACA TCGGAGTTCT ACGCAGCCGG CGGGAACCTC
AGCGCAAGGG AAAACGGGTT CGCACTTGCC GGCGACTGGA TGAGTGCCGC TGCGTTTCTG
GGATTTTCGG GGCTGGTTTC GCTATATGGC ATGGACGGTT CGCTGTATGC GGTCGCTGCG
CTCGCTGCGT TTCTCGTCGT ACTCATGCTG ATCGCCGAGC CGGTGCGTAA CACGGGACGT
TACACCTTTG GTGACGTTAT CGCAGAGCGG ATGAAACGGC CGGGCGCGCG CCTCGCCACT
ATTGTAGGAA CGGTGGTGGT CAATCTTGCC TACATGGTGC CGCAGATGGC CGGGGCCGGC
GCGTTGATCA AACTGATGCT GGGCGTCCCC TACGACGTCG CAGTCGTCCT CGTCGGCATT
GGCATGATCG TCTATGTTCT GTTCGGCGGA ATGATTGCGA CCACGTGGGT GCAGATTGTG
AAGGCGATGC TGCTTCTTGT TGCCGCGTGC GTTCTTGTCT CGATGCTGCT GGCGGCTGTG
CGGTTCAACC CGCTTGCACT GTTTGCATCT GTCGAAAGAC TCTACGGATC AAAAATGCTG
GCGTCCGGCG GCTACTTCCA TCATCCACTG GACACGATGT CGCTTTTCAT TTCGTTCATC
TTCGGTGTTG CCGGACTTCC TCACATCATG ACGCGATTTT ATACGGTCCC AGACGCAAGG
ACTGCCCGGA AATCGGTCCT ATGGCTCATG TTTCTAGCCG GCAGTTTTTT CATGGTCACC
ACGCTGATTG GGTTCGCTTC CGCGGTGTTC GTCGGCCAGG ACGCAATACG CGCCGCGGAC
AAGGGGGGCA ATCTCGCACT TCCATTGCTC GCGCAGTATC TCGGCGGCGG AGCGGGCTCG
CTGGGCGGAC AGATCTTTCT CGCCAGCATC TGCGCGATAG CTTTTGCCGC AATACTCGCA
GTTGTCGCCG GGCTCACGCT CGCTTCCTCT GGCGCTATAG CCCACGATCT TTATGTGAAT
GTCCTGCGTA AGGGGGCTGT CAGCGACGCT GAACAGGTCC GGGTCGCGCG TATCGCAACG
GTTGCCGTGG GGATAGCCGC AATCGGTCTG AGTCTTCTCG CCCAGGGCCT GAATGTCGGC
GTTCTCGTTA TTCTCGCCAT CTCGGTCGCG GCCTCCTCGA ATTTTCCGAT CATCCTGCTT
TCGATTTTCT GGCGCCGTTT CAATACGGCC GGCGTGATCG GTGGCGTCAT TGGCGGGCTT
ACCTCATCGG TTGCCCTTGC GTTCGTCGGT CCTGCTTTCA TGGGCAGCCA TGCGCTCTTT
CCGATCGTCA ATCCGGCGAT CGTCAGTCTG CCGATCGGAC TCTTCAGCGC GTGGCTTTGC
ACCATGCTGT CAAGGCCCAC ACCTACGCAG GATGGCGACT TCGAAGCGTT CTACCTGCGT
GCGCAAACGG GCATCGTGTG TGATGCCACA TCATCCAGAT CTTCGCGGTA A
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| Protein sequence | MKLLTIVIFM IILAVTLMIT YWAARRTRTT SEFYAAGGNL SARENGFALA GDWMSAAAFL
GFSGLVSLYG MDGSLYAVAA LAAFLVVLML IAEPVRNTGR YTFGDVIAER MKRPGARLAT
IVGTVVVNLA YMVPQMAGAG ALIKLMLGVP YDVAVVLVGI GMIVYVLFGG MIATTWVQIV
KAMLLLVAAC VLVSMLLAAV RFNPLALFAS VERLYGSKML ASGGYFHHPL DTMSLFISFI
FGVAGLPHIM TRFYTVPDAR TARKSVLWLM FLAGSFFMVT TLIGFASAVF VGQDAIRAAD
KGGNLALPLL AQYLGGGAGS LGGQIFLASI CAIAFAAILA VVAGLTLASS GAIAHDLYVN
VLRKGAVSDA EQVRVARIAT VAVGIAAIGL SLLAQGLNVG VLVILAISVA ASSNFPIILL
SIFWRRFNTA GVIGGVIGGL TSSVALAFVG PAFMGSHALF PIVNPAIVSL PIGLFSAWLC
TMLSRPTPTQ DGDFEAFYLR AQTGIVCDAT SSRSSR
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