Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5146 |
Symbol | |
ID | 6278119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1310845 |
End bp | 1311309 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616234 |
Product | DoxX family protein |
Protein accession | YP_001888877 |
Protein GI | 187919846 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.535914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGTAT CTGCGATTGG CACGGCGAGG CGGTTGATCC AGCAGCTCGC ACAACCGTGG CTCGTTCAAC TCGTCCTGCG GCTTGCCCTC GCTGTGCCGT TCTGGAAGTC GGGCATTCTC AAATGGCACG GCTTCCTTCA ACTGAGCGAT ACGGCGATCG ACCTGTTCAC GGACGAGTTC AAGTTGCACC TCCCAGGTGG TCCGTATCCG TTTCCCGCGC CAGCTGTTTT TGCGTTTCTG TCGGGGCTCG GCGAGGTGAC ATTCCCTGTG CTGCTCGTGC TTGGCCTCGG AACCCGGTTC GCCGCGGCCG GCCTGATATT GATGACATGC ATCGTTGAGC TGACCGTACC GGACGGCTGG CCCATCCATC TGACCTGGTT GGCAATGGCA CTGGGAATTG CAGCCTGGGG GCCTGGCCTG ATATCGATTG ACTATCTGCT TGGCGACAGG TCGCCCAGGT CGTGA
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Protein sequence | MVVSAIGTAR RLIQQLAQPW LVQLVLRLAL AVPFWKSGIL KWHGFLQLSD TAIDLFTDEF KLHLPGGPYP FPAPAVFAFL SGLGEVTFPV LLVLGLGTRF AAAGLILMTC IVELTVPDGW PIHLTWLAMA LGIAAWGPGL ISIDYLLGDR SPRS
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