Gene Bphyt_5146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5146 
Symbol 
ID6278119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1310845 
End bp1311309 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content61% 
IMG OID642616234 
ProductDoxX family protein 
Protein accessionYP_001888877 
Protein GI187919846 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.535914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTAT CTGCGATTGG CACGGCGAGG CGGTTGATCC AGCAGCTCGC ACAACCGTGG 
CTCGTTCAAC TCGTCCTGCG GCTTGCCCTC GCTGTGCCGT TCTGGAAGTC GGGCATTCTC
AAATGGCACG GCTTCCTTCA ACTGAGCGAT ACGGCGATCG ACCTGTTCAC GGACGAGTTC
AAGTTGCACC TCCCAGGTGG TCCGTATCCG TTTCCCGCGC CAGCTGTTTT TGCGTTTCTG
TCGGGGCTCG GCGAGGTGAC ATTCCCTGTG CTGCTCGTGC TTGGCCTCGG AACCCGGTTC
GCCGCGGCCG GCCTGATATT GATGACATGC ATCGTTGAGC TGACCGTACC GGACGGCTGG
CCCATCCATC TGACCTGGTT GGCAATGGCA CTGGGAATTG CAGCCTGGGG GCCTGGCCTG
ATATCGATTG ACTATCTGCT TGGCGACAGG TCGCCCAGGT CGTGA
 
Protein sequence
MVVSAIGTAR RLIQQLAQPW LVQLVLRLAL AVPFWKSGIL KWHGFLQLSD TAIDLFTDEF 
KLHLPGGPYP FPAPAVFAFL SGLGEVTFPV LLVLGLGTRF AAAGLILMTC IVELTVPDGW
PIHLTWLAMA LGIAAWGPGL ISIDYLLGDR SPRS