| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5093 |
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| Symbol | |
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| ID | 6277898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1255546 |
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| End bp | 1257096 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616183 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_001888826 |
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| Protein GI | 187919795 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.093357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.464925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGT TCAGCGTGCG GACGCTTGGA TTTCCGGAGA TCCGTCAGGA CGACCGGCTC
TGCCAGTTGC CCTTGCGCAA AGGCCTGGCC CTGCTGGTCT ATCTGGCCGA AGCGAATGGC
CCGGTCGCGC GCGATGCCGT CGCTGCAATG TTGTGGCCGG ATGGCGGCGA AGAGGTTGTG
CGGGCGCGGC TGCGGCGTCT GTTGCATCGC CTCCAGCACA CGCTCGGCGA CGACGTTCTC
GCGACAGACC GGTCAACCGT CCGATGGTCG GCGGCGATCG GTCTGCAAGT GGATTCCCAA
CTGTTCGAGC AAGCCTGCGA TAGTGGCGAC TTTGAGCGGG CGTGCCGCCA TTATTCCGGC
GACTTTCTCG ACGGTTTTTC GCCCGGCGAC TGCCCGCAGT TCGATGAGTG GGCTTTTTTT
CGCCGCGAGG CTCTGCGAAG CCGGGCGATC CAGGCGCTCG AGCGAGTGGT GCACGACAGG
AACGCAGCCG GCGACTACGC GGCCGCAGCC GCGCACGCCG GCCGTCTTGT CGAGCTCGAT
CCGTTCAGCG AAGTGTACGG GCGGCACCTC ATCCGCAATC TTATGCTCGC CGGAGACCAG
GCCACGGCCC AGCGGCACCT CGCGGCCCTG ACCCAACGGC TTCGCGACGA GCTCGATGTG
GCGCCCGAAT CCGAGACCCT CGCCCTGCTC GATGCCGGTG CGGCGTTGCC CTTCGAGGAC
CCGCCGTCGA CGCGCTACGT CAGCGGTAAC GGCGTCCATC TCGCCTACCA GACCTACGGC
GCCGGCCGCA TCGATGTGCT GGTGCTGCCA GGTTTCGTGT CTCACGTCGA ACGGCTGTGG
GAGGAGCCTC GCTGCCGGGC GTTCCTGTCC TCCCTTGCCG GGATGGGCCG CCTCATCCTG
CTCGATCGAC GCGGCGTCGG GCTGTCCGAC CGGGTCGGGT TCAATCCGGG CGTCGACGCG
ACCGCGCAGG ACATCGGCAC CGTGCTCGAT GCCGCCGGCA GCCGGAGGGT CGTGCTGTTC
GGTGCGTCAG AAGGCGGACC GGCATGCATC AGGTTTGCCG TCGATCACCC CGCTCGCGTC
GCCGGCCTCA TTCTGTTTGC TTCGTTGGCG AAAGGAACCG CGACGAGCGA CTATCCCCAC
GCGCTTCACA CCGGTCAGTA CGACATGTGG CTGCAGCAGC TCGTCGCAGC CTGGGGCGGC
CCCACGGGCA TCGAGACATT CGCGCCGAGC CTGTCCGTCG ACCCACAGGC GAGAGCCTGG
TGGGCAGGCT TGCTGCGGGC CGCGTCGAGC CCGGGCGCCA TCAAAGGTGT GCTCGAGGCT
TTGCGCGACA TGGATGTGCG GCATCTGCTG GGCCGAATTT CCGTGCCTAC GCTGGTGCTG
CATCGCCACG ACGATCGCGC CGTTCGCATC GGCGCGGGCC GGCATCTCGC CAGCCACATC
GCGCAGGCTC GATTCGTCGA ACTTGACGGC GCCGATCACT GGGCCTTCGC GGGCGATCAG
CAGCCTGTCC TCGACAACAT CAGGCAATTT GTCGGCAGTC TCACTGGGTA A
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| Protein sequence | MALFSVRTLG FPEIRQDDRL CQLPLRKGLA LLVYLAEANG PVARDAVAAM LWPDGGEEVV
RARLRRLLHR LQHTLGDDVL ATDRSTVRWS AAIGLQVDSQ LFEQACDSGD FERACRHYSG
DFLDGFSPGD CPQFDEWAFF RREALRSRAI QALERVVHDR NAAGDYAAAA AHAGRLVELD
PFSEVYGRHL IRNLMLAGDQ ATAQRHLAAL TQRLRDELDV APESETLALL DAGAALPFED
PPSTRYVSGN GVHLAYQTYG AGRIDVLVLP GFVSHVERLW EEPRCRAFLS SLAGMGRLIL
LDRRGVGLSD RVGFNPGVDA TAQDIGTVLD AAGSRRVVLF GASEGGPACI RFAVDHPARV
AGLILFASLA KGTATSDYPH ALHTGQYDMW LQQLVAAWGG PTGIETFAPS LSVDPQARAW
WAGLLRAASS PGAIKGVLEA LRDMDVRHLL GRISVPTLVL HRHDDRAVRI GAGRHLASHI
AQARFVELDG ADHWAFAGDQ QPVLDNIRQF VGSLTG
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