| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5078 |
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| Symbol | |
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| ID | 6279818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1240585 |
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| End bp | 1241505 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616169 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001888812 |
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| Protein GI | 187919781 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0909939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00473765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGACG TACGCGACGT AAATCTGAAC CGGCTGGCGA TCTTCGTCGC GGTCGTCGAG
GCGGGCTCGC TGACCGCCGC GGCAGCGCGC CTGGGCCTCG CCAAGACGAT GGTCAGCACG
CACATGCAGC GGCTCGAGGC CGAGGTCGGC GCGAGCCTGC TGGTGCGCAC GACGCGGCGG
CTCGGTTTGA CCGAGCCCGG CCGCGCGTTC TACGAAGCCA GCGTGAAAAT CCTCCGCGCC
ACCGAAGACG CGCTCGCGGC GATCGGCGGC GAAACGGCGC CCGTGCGCGG CACGTTGCGC
GTGAGCTCGC CGATCGATTA CGGTTCGCTT GCAGTCGCAC CGGTGCTGGT CGAACTGCGC
CGCACGCATC CGCAACTCAA TGTCGAGTTG TTGTGCACCG ATCGCTATGT GGATCTGATC
GCGGACGGTA TCGACGTCGC GATTCGCCTG GGCCGGCTTG CCGATTCCAA TTTCCGCGCG
GTGAAACTCG GCAGCTTCGT CAAATGGATC GTGGCGAGCC CAGATTTCGT CGAGACATGG
GGGCAGCCGC AGACACCCGC CGAATTGTCG GCGATGCCCT TTTGCGCGTT GACGGTGTTG
CCGCGTCCGC TGACGCTCGA CCTGCAACGC AACGGCGGCA CGGGCGATGG CGACGTGGAA
AGCGTGCGTT GTGAAAACGC GTTGCTGGTG AATACCGCCG ACGCCTGCCG TGCAGCAACA
CTCGCCGGCG GCGGCTTCGG GCTGTTGACG GATTTCTCGA TTGGCGGCGA CATTGCGGCC
GGCCGGTTGA TTCGCCTGCT GCCGGAATGG GCGACGGAGC CCGCGAGTAT TCAGGCTATC
TTTCCGCCCA CCAGTCATCC TCCGCGCAAA GTGCGGGCGC TAATCGAGAC GTTCAAGAAG
CAGCTCGAAC GCGCCGCGTG A
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| Protein sequence | MADVRDVNLN RLAIFVAVVE AGSLTAAAAR LGLAKTMVST HMQRLEAEVG ASLLVRTTRR
LGLTEPGRAF YEASVKILRA TEDALAAIGG ETAPVRGTLR VSSPIDYGSL AVAPVLVELR
RTHPQLNVEL LCTDRYVDLI ADGIDVAIRL GRLADSNFRA VKLGSFVKWI VASPDFVETW
GQPQTPAELS AMPFCALTVL PRPLTLDLQR NGGTGDGDVE SVRCENALLV NTADACRAAT
LAGGGFGLLT DFSIGGDIAA GRLIRLLPEW ATEPASIQAI FPPTSHPPRK VRALIETFKK
QLERAA
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