| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5023 |
|---|
| Symbol | |
|---|
| ID | 6277676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1174817 |
|---|
| End bp | 1175335 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642616114 |
|---|
| Product | putative membrane-associated protein |
|---|
| Protein accession | YP_001888757 |
|---|
| Protein GI | 187919726 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5612] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.651837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0723154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCC GATCGTGGAA AGTCGTGCTG GTAGCCTCGC TGGTGCTGAA TGTGTTTCTG
GTGGGCGCGA TCGTCGGGGG TGCCTATCAA TGGTTTGCCG CGCGCGGCGC AGCGGCGCCC
GTGCTGGCGC AGCAGCGCGC GCTGCGCTTC GCCGCGCAAA CGCTATCCGC TGAGCGGCAG
AAAGCCTTTA TCGACGGCCT GAAAGAAGCA CGCCGCGACG GCCGGCAATA TGCCCGCGAA
GGCCGCGAAG GGCGTCGCGA AGTGTTGCGT CTGCTGGCGG CGCCGCAGTT CGATCGTGCC
GCGCTGGACG CCGCGCTCGA ACGCACGCGC GAGGCCGACA GCCATCTGCG CGCGCAGGTG
GAAGGCAGCG TGGCCGACTT CGCGGCGACC TTGTCGCCCG AGGAGCGCGT TCAATTCGCC
GACAGTCTGA AGCTGCGTGG GCAATGGCGC GAACCCGCGC CCGCGCCGAA TGCGAAGAAG
CCGGCGAGTC AGGCATCGAG CGGAACTTCG GGCGAGTAA
|
|---|
| Protein sequence | MNGRSWKVVL VASLVLNVFL VGAIVGGAYQ WFAARGAAAP VLAQQRALRF AAQTLSAERQ
KAFIDGLKEA RRDGRQYARE GREGRREVLR LLAAPQFDRA ALDAALERTR EADSHLRAQV
EGSVADFAAT LSPEERVQFA DSLKLRGQWR EPAPAPNAKK PASQASSGTS GE
|
|---|
| |