| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5015 |
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| Symbol | |
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| ID | 6279096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1168051 |
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| End bp | 1168443 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616106 |
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| Product | alkylhydroperoxidase like protein, AhpD family |
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| Protein accession | YP_001888749 |
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| Protein GI | 187919718 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0965008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0295015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGC TCAAAGCCGT CGAATACGCT GCGGCGTCGC CGGAAGTCAA AGCCGTGTAC
GACGATATCA AACAGACCCG TCAGGTCGAC GACGTCAACA ACTTCTGGAA GTACATCGCC
CAGCATCCGC CAACTCTCGC GCGCACGTGG GACAGCCTGA AGGACGTGAT GGCGCCCGGT
GCGCTCGATC CGTTCATCAA GGAATTGCTC TACGTCGCGG TGAGCGTGAC GAACAACTGC
GGCTACTGCG TGGCGAGTCA CACGGCGGCC GCGCGCCGCG CCGGCATGAC TGACGAGATG
TTCGGCGAAT TGCTCGCGGT CGTGGGCATG GCCAACGAGA CGAACCGGCT GGCAGTGGGA
TACCGCGTGC CGATCGATCC GGCTTTCGAG TAA
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| Protein sequence | MSQLKAVEYA AASPEVKAVY DDIKQTRQVD DVNNFWKYIA QHPPTLARTW DSLKDVMAPG
ALDPFIKELL YVAVSVTNNC GYCVASHTAA ARRAGMTDEM FGELLAVVGM ANETNRLAVG
YRVPIDPAFE
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