| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5004 |
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| Symbol | |
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| ID | 6279941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1147303 |
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| End bp | 1148247 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616090 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001888738 |
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| Protein GI | 187919707 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5581] Predicted glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000646508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000203708 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAATC CAGTCGAGGA ACACGTCGAG GAAGCCTCAC CCGCAGCCCA AACTCCGGCC
TTGAATCCGG AAAACGTGCC GGTAGGCAAG CCTCTCGACT GGCCGATCGT CGACGCCGAC
GGCACGCTGC TGTTCACCAG CGGCACCATC CTGGCGACCA CGGACGAGCG CAACTTCCTG
TTCGCGCACT TCCGTCCGCA GCGCGGCGAC TTACTGGACG CGACCACGCA ACCGCCACAG
CAGACAGAGC CGCAAGCGGA CCCCAACGGC GAACTGACGC TCAAAGACAT GCATCTGGAA
ATCGGTGCAT TGATCGGTGT GCGCTCGCAG CTCGGCAGCG GCGCGCCCAT GCATCCGTGC
CGCATCATCG GTTTCGCGCC GAATCATTCG CTTTTCGTTA CTCCGCCGAT GCACGAAGGC
CGCATCTTCC CGCTCGGCAT CGGTGAAAAC ATCGAAATCG TCGCGATTGC GAGCCATGCG
GTGTTCCGTT TCGTCTGCAC GATCGAAGCG ATCTGCCGCA CGCCGTTCGA TTATGTCGTG
CTGTCGAAGC CCGGCGTGAT CCGCCGCCTG CGCGAACGCA AATCGATCCG CGTTCGCGCG
CACCTCGCGG TGCGTTTCGG CATCGGCGAA ACCGGCGAAT CCTATGAAGG CCTCGGACTC
GCGAAAGGCA TTAGCGCACT CGGCATGTCG CTGACCGCCT CATGGAGTCT CGGCGCCGTC
GGCGACCGGT TGCGCGTTGC CTTTCGCCTG AAGTCGAAGG ATCTCAACAC GGAGATCGAA
ACCACGGCGG TGATCCGCAA CGTGCAGAAA GGCAGCGGCC CCGGCGAGCC CTCGACTCAC
GGGCTCGAAC TCGATCAACT CGACGCAGCC CAGCAGATGG CAATGAAAGT CTTCGTGTTC
GACCGTCAGG ACGATGTGGT GTATTGGTCG AACGGCCTGA AATAA
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| Protein sequence | MDNPVEEHVE EASPAAQTPA LNPENVPVGK PLDWPIVDAD GTLLFTSGTI LATTDERNFL
FAHFRPQRGD LLDATTQPPQ QTEPQADPNG ELTLKDMHLE IGALIGVRSQ LGSGAPMHPC
RIIGFAPNHS LFVTPPMHEG RIFPLGIGEN IEIVAIASHA VFRFVCTIEA ICRTPFDYVV
LSKPGVIRRL RERKSIRVRA HLAVRFGIGE TGESYEGLGL AKGISALGMS LTASWSLGAV
GDRLRVAFRL KSKDLNTEIE TTAVIRNVQK GSGPGEPSTH GLELDQLDAA QQMAMKVFVF
DRQDDVVYWS NGLK
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