Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4989 |
Symbol | |
ID | 6280445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1127985 |
End bp | 1128788 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616075 |
Product | Peptidase M23 |
Protein accession | YP_001888723 |
Protein GI | 187919692 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0293299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0646806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT GTTCGTCCCG TTTTGCCAGA TCGGGCTCTT CCATACTATT CGCGTTGTTG CTGGCCGCGT CGTTGACAAG TTGTGCATGG CTCGCGCCGC CGGCACGTCC GACCCATGTC GACGAGGCGC CGCCGCCCGC GGCTGCATTC TCGAATGCGC CGACGCCGGT GCCCACTTCG CAAATTCCGG CGGGCTTCTA CCGCGTCAAT CCCGGCGACA CGCAGATCGG CGTCGCCAAG GCGTTCGGTC GCGAGCCTTC GGCGCTCGCG CAGTGGAACC ACTTGTCGTC CACCGACGGT CTGCGCGTCG GCCAGATGCT GCGGGTCGCG CCACCGCTGG TTGCCGTCAC ATCGTCCGCG ACCGGCACGC CTTCGAATTC GCTTGAACAG GCGCGCGCCA TCTTCGCGGA TGGCCCGAGT GAACCCGCGT CCGCAAAGGC TCGACTCGCA TGGCCGGTGA GCGGTCAGGT GAGCGCGCCG TTCGTGTTGG GCAAGACCAA GGGGATCTTG ATAGGCGGGC GCGTCGGCGA ATCCGTGCGG GCTTCGGCGG GCGGCCGCGT TGTGTACGCG GGCGGGCGCA TCGCGGCGTA CGGCAAGCTG ATCATCATCA AGCACGACGC CCATCTGTTG ACGGCATACG GCAACAACCG CGCGCTGCTC GTCAAGGAAG GCGCGGACGT CAAGGCTGGC GAGGTGATCG CCGAAATGGG CGCGGACGAC AAAGGCCAGG CGTCGCTGCG CTTCGAAGTG CGCACGGACG GCAAACCGGT CGATCCGCTC AAGTACCTCC CGCAACGCCA GTAA
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Protein sequence | MKTCSSRFAR SGSSILFALL LAASLTSCAW LAPPARPTHV DEAPPPAAAF SNAPTPVPTS QIPAGFYRVN PGDTQIGVAK AFGREPSALA QWNHLSSTDG LRVGQMLRVA PPLVAVTSSA TGTPSNSLEQ ARAIFADGPS EPASAKARLA WPVSGQVSAP FVLGKTKGIL IGGRVGESVR ASAGGRVVYA GGRIAAYGKL IIIKHDAHLL TAYGNNRALL VKEGADVKAG EVIAEMGADD KGQASLRFEV RTDGKPVDPL KYLPQRQ
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