| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4972 |
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| Symbol | |
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| ID | 6279699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1110228 |
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| End bp | 1110869 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616058 |
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| Product | DNA-3-methyladenine glycosylase |
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| Protein accession | YP_001888706 |
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| Protein GI | 187919675 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.537509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.124198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGAAAC ATCAACTCCC CATCCTGCCC TTGCTTCGTG ACGATTTGCC TCTCGACACC
GTCGAACTCG CGCGCTTCAT GATCGGCAAA TACCTCGTGC ACGATCTGCC CGAAGGCCGC
ATGAGCGGGC GCATCGTCGA GACCGAGGCG TATCCGCTCG GCGATTCGAC CAGCCATGCA
TTCATGGGCC GCCGGCCGCA TAACGGTTCG ATGTTTCTCG CGCCGGGTCA CGCGTATGTG
CGGCTGACCT ATGGGCTGTC GTACATGCTC AATATGTCTG CCGAAGCCGA GGAAGTCGGC
GCCGGCATTC TGCTGCGCGC GATCGAACCG CTCGAAGGCC TGCCGTTGAT CGAAGCGCGG
CGCCCCGGCG TGCCGTTGCG CGATCTCGCG CGCGGACCCG GCCGGCTCAC GATGGCGTTC
GGCGTCGGAC CGTCGTTCGA CGGCTGGGAT CTGTGCTCGG GGCAGGGCTT GTGGATCGGC
GTTATCGAGC GGGGCGAGGT GCCGGTCGGT GTGACAACGC GCATTGGCTT GTCGCGCGAA
ATGCATCAAC CGCTCAGATT CTTCGAACCC GGCAGCGCCT TTGTCAGCGG GCCGCGCAAG
CTGCTGGTAA CGCCCCAGTC CGGTGCGCCG AAGCGGGCGT AA
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| Protein sequence | MRKHQLPILP LLRDDLPLDT VELARFMIGK YLVHDLPEGR MSGRIVETEA YPLGDSTSHA
FMGRRPHNGS MFLAPGHAYV RLTYGLSYML NMSAEAEEVG AGILLRAIEP LEGLPLIEAR
RPGVPLRDLA RGPGRLTMAF GVGPSFDGWD LCSGQGLWIG VIERGEVPVG VTTRIGLSRE
MHQPLRFFEP GSAFVSGPRK LLVTPQSGAP KRA
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