| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4922 |
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| Symbol | |
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| ID | 6278363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1049292 |
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| End bp | 1050284 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616008 |
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| Product | type VI secretion-associated protein, BMA_A0400 family |
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| Protein accession | YP_001888656 |
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| Protein GI | 187919625 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.179428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0474232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA CCGTGCAGGC GCAAATCGCC TACTTCGGCA AGATCCCGTC GCGCGGCGAC
TTCGTGAAGA GCGCGCATAA CCCGCAATTG CTGGCCACGC TCGACCGCTG GATCGCCGAA
GCCATGGAAC TGCTCAGCGA CGATCCGCGC TGGAAGATCG TCTACGAAAA CGCCAAGCCG
ATGCACTTCG CGTTCCTCGG TTCGCGCAGC AAGCTGGCGA TTGCCGGGCA TATGGTGGCG
AGCCACGATC AGTCGTCGCG GCGCTTTCCG TTCCTTGCCG CCACCGCGCT CGAAGTCGAA
AAGCCGCTGA CGTTTCTGGC GCACAGTCCG CTCGCGTTTG CGCGCTTGTG GTCGCGCGTC
GCGGCGCAAA TGAAGCCGCT GCTCGGCGCG AGCGAACCGC CCGGCGCGCT GCAGGCGCTC
GGCGAAACGC AAGTGCCGAT CGAGATCGGC GGCGGTCCGG GCAATCCGCA CGACGGTACG
TTCAATGACT TCGTCGAACA CCAGACGCTC GCCGGGCTCG AACAGATGCT GCTGGCGAGC
GGCCATCCGG TGCGCTTGCG CGGCGCGATG CTGGCGCTCG GCTCACTGCT GCGTCCGGTG
ATGCAAAGCG GCTCGTCGCA TCTCGAACGC GGGCTGACCT TGCCGCTGCC GAACGACCCT
TTCTATCGCA GTCTCGTTGC TGCATTCTGG CTCGAACTGA TTGCGCCGTT CGTCGCGCAG
GCGGATTTCG AGCTGGCGAT TTTCATCGGC ACGATTGCCG AGCGCGAGCG GCTCATCATC
GGCTTCAATG GCGCCTCGGC CAAAACGCTG CATAGCGTGG TCGATCCGCA GTCGTACGCG
GCGCACAACA TCGATATCGA CGATCCCGAG TGGATCGACG AACACGCACA AAACGATCAT
GGCATCAGCA AGCTCGTCAG TTACCTCGAC CAACCGCAAC TGTCGCTGCG CGTCAGCATC
GACACGTTCC GCGAAGCATT CACGGGAGCG TGA
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| Protein sequence | MTQTVQAQIA YFGKIPSRGD FVKSAHNPQL LATLDRWIAE AMELLSDDPR WKIVYENAKP
MHFAFLGSRS KLAIAGHMVA SHDQSSRRFP FLAATALEVE KPLTFLAHSP LAFARLWSRV
AAQMKPLLGA SEPPGALQAL GETQVPIEIG GGPGNPHDGT FNDFVEHQTL AGLEQMLLAS
GHPVRLRGAM LALGSLLRPV MQSGSSHLER GLTLPLPNDP FYRSLVAAFW LELIAPFVAQ
ADFELAIFIG TIAERERLII GFNGASAKTL HSVVDPQSYA AHNIDIDDPE WIDEHAQNDH
GISKLVSYLD QPQLSLRVSI DTFREAFTGA
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