| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4824 |
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| Symbol | |
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| ID | 6279441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 938324 |
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| End bp | 939244 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615911 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_001888559 |
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| Protein GI | 187919528 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00452442 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0267475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCTCA CCCAACGTCA ACAAGGCGCC ATCACGCTGG CCAGCGGCGG GCTTCTGATG
GGCACGCTCG GCATCTTCGT CGAGGAAGCG CAGCTCGGCG CGCTCACGCT CGTATTCTTT
CGCTGCCTGT TCGGCTTTCT CTCGCTCGCC GCGTATTGCG CGTGGAAGGG CTTCTTCACT
CGCGCGCATT TCACGCGGCG CACCGTCGCG CTGGCGCTGA TTTCGGGCGT GCTGATGGTC
ACGCAGTGGG TCGGTTTTTT CGACGCGATT CATCGCACCA GCATCGCGGT CGCAACCGTG
GTGTTTCACG TGCAGCCGTT CTGGGTCGTG CTGATCGGCG CGGCGTTGTT CAACGAGCGG
CTCGGCATGG ACCGGCTCGG CTGGATCGCG ACTGCTTTTG TGGGGCTCGT GCTCGCGTCG
GGCGTCGCGG CCACGGAGAA CCTACAAGGT CATGCGAGCT ACCTGATCGG GATCGGCGAA
GCGCTGGTGG GATCGGTGCT GTATGCGAGC GTCACGCTGA TCGCCAAAGG GCTCGGCAAT
TTGCGTCCGC ATCTGCTGAC GCTCGCGCAG TGCGCGGTCG GTGTGGTGTG CCTGCCGTTT
ATCGCGCCGC TCACTGCCGT GCATATCGGA CCGATGCAGT GGTTCTGGCT AGTCGGCATG
GGCGTACTGC ATACGGGGCT TTCGTACGTG CTGATTTACG GCGCGTTGCC CAAGCTGAGC
ACGCCGATCA TCGCCGTGCT GCTGTTCGTG TATCCGCTGA CGGCGATCGT GGTCGATGCG
CTCGTGTACG GACGGACATT GTCGATGTTG CAGCTGGCGG GCATGGCGTT GATCGTGGTG
GCGAGTCTGG GGGTGAATCT CGGCTGGCCG TTGCTTTCGG TGCTGCGGCC AGGCGGACGG
GTGCGGCGGC AGGTGGATTG A
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| Protein sequence | MSLTQRQQGA ITLASGGLLM GTLGIFVEEA QLGALTLVFF RCLFGFLSLA AYCAWKGFFT
RAHFTRRTVA LALISGVLMV TQWVGFFDAI HRTSIAVATV VFHVQPFWVV LIGAALFNER
LGMDRLGWIA TAFVGLVLAS GVAATENLQG HASYLIGIGE ALVGSVLYAS VTLIAKGLGN
LRPHLLTLAQ CAVGVVCLPF IAPLTAVHIG PMQWFWLVGM GVLHTGLSYV LIYGALPKLS
TPIIAVLLFV YPLTAIVVDA LVYGRTLSML QLAGMALIVV ASLGVNLGWP LLSVLRPGGR
VRRQVD
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