| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4760 |
|---|
| Symbol | |
|---|
| ID | 6278193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 870088 |
|---|
| End bp | 870771 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642615842 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001888495 |
|---|
| Protein GI | 187919464 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00176778 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0056462 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTC TCCTCGTTGA AGACGACCTG CAGATCGGTC AAAGTCTGCT GCGCGCCCTC
AAGGACGCCG ACTACAGCGT CGACTGGGTG AGGGACGGCG TAGCCGGGCG CGACGCGATG
GCCAATGCCG AATACACCGT CGTGCTGCTC GATCTGGGCT TGCCCGGCTT GAGCGGCATC
GAGTTGCTGA AGTCGTCGCG CGCGGCGGGC AACGCGGTCC CGGTGCTGAT CCTGACCGCC
CGCGACGATC TCGATTCGCG CGTACAAGGC CTCGATGTCG GCGCCGACGA CTACCTCCTG
AAACCGTTCG ACGTCCCCGA ACTGCTCGCC CGCATCCGCG CCGTACTGCG GCGCAAAGCG
GGCTACGCGT CGTCGCGTCT CGGCGACGAA TCGCTCAGCC TCGATCTCGA CAAGCGCACG
CTGACCTGCA ACGGCGCAAC GACCGTACTG TCCGCACGCG AATTCGCGCT GATGCTCGCG
TTTCTCGAAC GCCCCGGCAC GATCCTGTCG CGCGAACAAC TCGAAGACCG TTTGTACGGC
TGGGGCAAAG AGGTGGAAAG CAACGCGGTG GACGTGCTGA TTCATTCGGT GCGCAAGAAA
TTCGGCCTCT CGGTGATTCG CAATGTGCGC GGGCTCGGCT GGACCGTCAT GCTCGGCGAA
GCCGGCAAGG GACCGGCGTC ATGA
|
|---|
| Protein sequence | MRILLVEDDL QIGQSLLRAL KDADYSVDWV RDGVAGRDAM ANAEYTVVLL DLGLPGLSGI
ELLKSSRAAG NAVPVLILTA RDDLDSRVQG LDVGADDYLL KPFDVPELLA RIRAVLRRKA
GYASSRLGDE SLSLDLDKRT LTCNGATTVL SAREFALMLA FLERPGTILS REQLEDRLYG
WGKEVESNAV DVLIHSVRKK FGLSVIRNVR GLGWTVMLGE AGKGPAS
|
|---|
| |