| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4625 |
|---|
| Symbol | |
|---|
| ID | 6278043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 708607 |
|---|
| End bp | 710145 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642615713 |
|---|
| Product | Propeptide PepSY amd peptidase M4 |
|---|
| Protein accession | YP_001888366 |
|---|
| Protein GI | 187919335 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0791517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.93462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCA CCACTGGCGC CGACGTCCGG CGCGTCACGC CGGCGACCAC CGCTGTCCAT
CCAGGCTATC GCACGCTCTG GCGCTGGCAT TTCTACGCGG GTCTCTTCGT GATGCCGTTT
CTGGTCGTGC TGGCGATCAC CGGCACGCTG TATTGCTTCC AGCCGCAAAT CGAGCCGCTG
CTCTATCCGG GGCGCCTGAT CGTCGCGCCG CAAGCCGCGC CGAAGCTGCC CGAAGAAGCG
CTGCTGGCGA GAGCGCGCGC GGCCATGCCA CCGACCGCGC TCGCGCTGAC CGCGGTTGTC
GCGAACGCAC CGGAGCACAG CGCCGAATTC GTCTTCCGTC TCGCGGACGG CGATAAGCAG
AGCGTCTATG TGAACCCCTA TACGGGCGCG GTGCTGGGCA CGCTAAGCGT TGAGCGCCGC
TTCATGCAAG TGGACCGGAT GCTTCATCGC AAGCTGCTGC TCGGCAAACC CGGCGAGCTG
CTGATGGAGC TGGCCGCATG CTGGACGCTC GTGATGATCG GCACAGGCGT CGCGTTGTGG
TGGCCGCGCG AGAAAACCAC TGCACGTGCG GCGCTGTTGC CGCGCTTTGC GCTGAAGGGA
CGCGCGCTGT GGAAGAACCT CCATGCCGTG ATGGGCGTCT GGCTCGCGCT CGGCGCGCTC
GCGTTCGTGT TGACGGGACT GCCGTGGACG GGTTCGTGGG GCAAGCAATT CAAGGCGCTC
GCGACCGCCG CGAATCTCGG TGCGCCACCG GGTTCGCGGG GCGCTTTGCC AATGCGTTCC
GTCATGCCAG CAAAGAACGG CGCGCAGCAC TCCGCACCGG ACACGCACGC GGACAACACG
GCGCACAATG AGCACGCCGA ACACAACGGC CACGGCGTCC ATGACGCCAG TATGAACTCG
ATGCCCGGCA TGGTGATGGA CGACCTGCCG CTGCCGCTCA CGCCTTGGGC CGTCGGCAAC
ACACGCGTGC CCGACTCCCG CCCACCCACC GCCGCCGACG AGGCGGGCGC CGCGCATCCG
CTGCCGCTCG GACGCGTCGT CGCGCTGGTT GCCTCGCTCG GCGTGACGGA GGGCTACAAC
ATCGTGCTGC CTGCTTCCGC GACTGGCGTC TACACCGTCT CGTACTTTCC GGACGATCCG
AAAGACCAGC GCACGCTGTA CATCGACCAA TACAGCGGCG CAGTTCTGAA GGACATCCGC
TATGCAGATT ACGGTGCGGT GTCGAAGGCC GTGTCGTACG GCACGTCGCT GCATATGGGC
CGTTATTTCG GCGTCGCCAA TCAGATTCTC TGCGCCGTGA TTTCTATGGG ACTGGCGGCG
ATGGCCATCA CCGGCTGCGT GATGTGGTGG AAGCGGCGGC CGCAACGCTC GCTCGGGGCA
CCGTCGCGCG AACGCGCCGC GCCGCCGATG CGCGGCTGGA AAATCGGCCT CGTCCTGCTC
GGCATCGTGT TCCCATTGAT GGGCGCCACG CTGCTTGCGG TGTGGCTTGT GGACCGGGCG
ATCTTCGGCC GTGCCGCGCG GCGGGCGGCG ACGCCGTGA
|
|---|
| Protein sequence | MSTTTGADVR RVTPATTAVH PGYRTLWRWH FYAGLFVMPF LVVLAITGTL YCFQPQIEPL
LYPGRLIVAP QAAPKLPEEA LLARARAAMP PTALALTAVV ANAPEHSAEF VFRLADGDKQ
SVYVNPYTGA VLGTLSVERR FMQVDRMLHR KLLLGKPGEL LMELAACWTL VMIGTGVALW
WPREKTTARA ALLPRFALKG RALWKNLHAV MGVWLALGAL AFVLTGLPWT GSWGKQFKAL
ATAANLGAPP GSRGALPMRS VMPAKNGAQH SAPDTHADNT AHNEHAEHNG HGVHDASMNS
MPGMVMDDLP LPLTPWAVGN TRVPDSRPPT AADEAGAAHP LPLGRVVALV ASLGVTEGYN
IVLPASATGV YTVSYFPDDP KDQRTLYIDQ YSGAVLKDIR YADYGAVSKA VSYGTSLHMG
RYFGVANQIL CAVISMGLAA MAITGCVMWW KRRPQRSLGA PSRERAAPPM RGWKIGLVLL
GIVFPLMGAT LLAVWLVDRA IFGRAARRAA TP
|
|---|
| |