| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4612 |
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| Symbol | |
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| ID | 6278244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 696070 |
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| End bp | 696606 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615700 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001888353 |
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| Protein GI | 187919322 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.386766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGG TTCCTTTTCC AGTTGGTCCA TGCGTGATGG CGCTAGTACT CGTCGCCGCA
CTATGGGATC TGCAAACGCG CCGGATTCCT AACTGGTTGG TCGTGACAGG ATTGATCGTG
GCGATTCCGG TGCAGTGGTT CACGCACGGT GTCGTCGATG GCATGACGAT GTGGATGGGC
GGCATGCTGG CCGGCGGCGC GTTTTTCCTG CCGGGCTACG CGATGCGGCT GATGGGCGCG
GGCGACGTGA AGCTGATGGC GGCCATCGGC GCCTTCTGCG GCGCTTACGG CGCACTGGAA
ATCGGTTTGG CGACCTGTGT GATCGGTGCA ATCGGGTCGC TCGCAATATG GCTGCGGCGT
CGCCAGATGC GCGCCGGGCT GAACGGGGCG GCGGCATTGC TGATCAGTTG CGCGACGCCG
GGCAACGGCG CGCTGCGCAG GTCAGGCAGT GTGGCTGAAA GCAGTGCGAC GGGGACCATG
CCTTACGGCA TTGCGATAGC AATAGGCAGC GCATGCGTGT TGTTCGCCAG CGTGTGA
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| Protein sequence | MNGVPFPVGP CVMALVLVAA LWDLQTRRIP NWLVVTGLIV AIPVQWFTHG VVDGMTMWMG
GMLAGGAFFL PGYAMRLMGA GDVKLMAAIG AFCGAYGALE IGLATCVIGA IGSLAIWLRR
RQMRAGLNGA AALLISCATP GNGALRRSGS VAESSATGTM PYGIAIAIGS ACVLFASV
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