| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4592 |
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| Symbol | |
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| ID | 6278045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 675513 |
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| End bp | 676196 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642615681 |
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| Product | TonB family protein |
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| Protein accession | YP_001888334 |
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| Protein GI | 187919303 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCTGA CCATTTCAAT CGATGATTCG CCGACGCTTC GGATCGTACT GGCGATCGTC
GTCGCGCTCG TAGTCTGGAT CGTGTTTCTG TACGCGCTCG GACATTGGCT CGACGCAACG
ACATCGCAGC CAGCGCCAGA TAAGCCGCTG GAGATGCGCG TGGTGGAACT CGATCCGCAG
GCGCCAGTGC ATCGCGAACC GGCGCCCACG GTCAAACCAC AGCGACCAGT CGAGCCACGT
CAGCATGTTG CGCCGAGACC CGCTGAAGCA CGCACACCGC GGCAACCGAC ACCGGACGTT
CAGCCAACTC GAATCCCCGC TCCCAATGAA TCCACCGCGT CCACCGAGTC CACCGCGCGT
TCACCTAACT CCCAAGAGGA AAGACAAAGC ACATCACAAC CCACTCTCCC TCCCGGCGAC
ACAGCCGCGC GCTCTATCGC GCAACCGTTA CCCGAATTAC CCGACGATCT ACGCGAGCAA
GCCTATCAAA CCGTTGCGAC CGCGCGCTTC GTGATTCATG TCGACGGCTC GGTCGATGTC
GAACTGCTCA AGCCGACTCA AAATCCACGC CTCAACCAGC TTCTCCTCGA AGCCCTACGC
AAATGGCGCT TTTTTCCGGC ATTGCAGGGC GGCCATCCGA TCGAAAGCAG GCAGGACGTC
CGCGTGCATT TCAATGTGAG CTAG
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| Protein sequence | MRLTISIDDS PTLRIVLAIV VALVVWIVFL YALGHWLDAT TSQPAPDKPL EMRVVELDPQ
APVHREPAPT VKPQRPVEPR QHVAPRPAEA RTPRQPTPDV QPTRIPAPNE STASTESTAR
SPNSQEERQS TSQPTLPPGD TAARSIAQPL PELPDDLREQ AYQTVATARF VIHVDGSVDV
ELLKPTQNPR LNQLLLEALR KWRFFPALQG GHPIESRQDV RVHFNVS
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