| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4577 |
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| Symbol | |
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| ID | 6279080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 653652 |
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| End bp | 656732 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615667 |
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| Product | hypothetical protein |
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| Protein accession | YP_001888320 |
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| Protein GI | 187919289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.298557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGC CGCTGGTTCG GTTACCGTTT CGCGCAACAG GCGTGGCGTC TGTGCGCAAA
TGGTTCAAAT GGGCGCTGGT CGCGGCATTT TTGCTCGCGC TGGCATTGGC GGCACGCTTT
TGCCAGAACG AGATCGAAAC CTCGCGATTG CAGGCGCACT ATCTCTCCGA ATTGACTCGC
GACGTGGGTT TCTCCGTCGC CGACGGTCCT AGTCATTCCA TCCGTTTTCC CGAAGCCGAC
AAAGGCCCTT ACGACAGCCG TCTGGGCTAC GCGTTGCTAC CGTCGATCCA GCAGCGTCTG
CTGCAACGCG GCTTTGAAAT CACCGCCCAG GCGCGCGATT CCGAGCGGAT GCTGTCGCTG
GCGGATAACG GCCTCTTTCT GCCGTACGAA GAAAAAGATC GCGCGGGCCT GCAACTCTTC
GACGGCACCG GCGCGCCGCT GTTCGCCGCG CAGTTTCCCG GCCGCGTGTA CGACGACTTC
GATGCGATTC CGCCGCTGGT CGTGAATTCG CTGCTGTTTA TCGAAGACCG CTACCTGCTC
GATCCGAACC AGCCGAACCG CAATCCCGCC ATCGACTGGG GGCGCTTTAG CCGCGCGTTG
GCCGATCAGG GCGTGCGCGT GTTCAATCAC CATCAGTCGC AGCCCGGCGG TAGCACTCTC
GCCACGCAGA TCGAAAAATT CCGCCACTCC GCGGGCGGCC GCACGGCGAC ACCGCCGGAG
AAATTGCGGC AGATCGCCTC GGCTTCGGTG CGCGCTTATC TGAATGGCCC GCAAACCATG
CCGGCGCGCC AGCAGATCGT GGTCCACTAT CTCAACTCGG TGCCGCTGGC CGCGCAGCCG
GGCATCGGCG AAATCAACGG TATTGGCGAC GGTCTCGCCG CCTGGTATGG CCGCGACTTC
AACGACGTCA ACCGCGTCCT GATCGCTCCG TCGACCGAAC AGAATCTGCC GGAGCAGGGC
ATCGCATTCC GGCAGGTGCT TTCGTTGATG ATCGCGCAAC GTGCGCCGTC GTATTTCCTG
CATCACGGCT ACAAGGAACT TGAGCGGCTG ACGGACAGTT ATCTGCGGCT GCTGGCGAAC
GGCGGCATTG TGTCGGTCCC GTTGCGCGAC GCCGCGCTCT CAGCGGTGGT CGATTTGCAG
CGCGCGCCCG TCAAAACTGC CAGTGCGGAT TCCTTCGTGT CGCGCAAGGC GGTGACGTCC
ATGCGCTCGC ATCTTCTGGC CGCGCTCAAC ATTCCGAGCT TCTACGAACT CGACCGCCTC
GATCTACAGG CGAATGGCAC GCTCAACAAC GCCGTTCAGC AAGCCGTGAG CGACCGGCTC
GCCGCTGCCG CCACGCGCGA CGGCGCGAAA GCCGCGGGTC TGGTCGGCTT CGAAATGCTG
CGCGCGTCGG ACGATCCTTC GAGGATCGCG TATAGCTTCA CGCTGTTCGA GCGGCGCGAC
GGCGCCAACC TCGTGCGGGT GCAAACCGAC AGCGTCAACC AGCCGTTCGA CATCAACTCC
GGCGCGCGCC TGAATCTCGG TTCGACGGCG AAACTGCGTA CCGTGGTGAC GTATTTGCAG
ATCGTCTCCG ACTTGCACAA GCGTTATGCG CCGCTGAGCA CAGCGGAGCT GAAAGCCGTG
AAGTACGATC CGAACGATCA ACTCACGCGC TGGTCGCTCG ATTATTTCGC GCACACCTCG
GACCGTTCGC TGCAAGCCAT GCTCGACGCG GCCGTGGAGC GAAAATACTC GGCCAGTCCC
GGCGAAACTT TCTACACGGG CGGCGGCGCG CAGACCTTCA ACAACTTCGA ATCCGACGAC
AACAGCCGCA TCCTGACCGT GCACCGCGCG TTCCAGCATT CGGTGAATCT GGTGTTCGTG
CGGCTGATGC GCGACATCGT CCATTACGAA ATGGTGCAGA CCACCGGGCC GTCGGCGCAA
TGGCTGGGCG ATCCCGAGAT GCGCAAGATG TATCTGACGC GCTTCGCCGA TCAGGAAAGC
CGCGTGTACA TGAACCGTTT CTACACGAAG TATCACGGCA AGACACCCGA TCAGGCCTTG
TCGCTGCTGC TGCTCGGCGT GCGCAAATCG CCGCCCAAGG TGGCGACGGT GTTGCGCAGC
GTCGCGCCGG ACGAGTCCAA TGCGTGGTTC AACCTCAAGA TGCGCGCGGC GCTGAAAAAC
ACGCCCGCCG CCTCCGTACT CGACGACGAA GACCTGGCTA ACCTGTACGC CAAATACGCG
ATCGACCGCT TCAATCTGAA CGATCGCGGC TATATTTCGA GCGTGCATCC GCTGGAACTG
TGGACGCTCA ACTATCTGCG CGAGCATCCC GATGCGACGC TCGAACAGAT CCAGAGCGCG
AGCCGCGAGG TACGTCTGTC GACTTATTCG TGGCTCTTCA AGACGCGCTA TCACGCGACG
CAAGACCGCC GCATCAAACG CATGGTCGAA CTGCGTGCCT ACGACGCCAT CGGCAAATCA
TGGCAGGCGC TCGGCTATCC GTTCGCGACG CTCACACCTT CGTATGCCGC GGCAATCGGC
GCGTCGGGCG ACCGGCCGGC CGCGCTCGCG CAATTGATCG GCGTGGTCGC CAATAACGGC
AACAAGGTGC CGACGGAAAG CCTCACGCAA CTCGACTTCG CGAAAGACAC TCCGTACGAA
ACGCATTTCA AACGCGCGGC GGTGGCGCCC GAGCCGCAGT TGTCGCCGGA AATCGCGAGC
ACGGTGAAAG TGTTGTTGCG CGATGTCGTG ACCGGCGGCA CGGCGAAGCG TCTCGCGCAA
GGCATGACGT TCCCCGATGG CCAGACGCTC GAGGTGTACG GCAAGACCGG TACCGGCGAT
CAGCGCTTCA ATGTGTTTGC CAAAGGCGCG CGGCTGATCG AGTCGCGCAA GGTGAACCGT
AGCGCGACCT TTGTGTTCGC GATGGGCGAC CGGTTCTACG GCACCTTGAC CGCGTGGGTG
CATGAACCGT ATGCCGCGCA TTACGAGTTC ACGAGCGCGC TGTCGGTGCA GTTGCTGAAG
TCTTTGGCGC CGGTCTTGCA GCCGTTGCTG AATGAGACGC CTGTGAAGAC GGCTTCGGTT
ACGAAGGTTG CCGCGCAATG A
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| Protein sequence | MNRPLVRLPF RATGVASVRK WFKWALVAAF LLALALAARF CQNEIETSRL QAHYLSELTR
DVGFSVADGP SHSIRFPEAD KGPYDSRLGY ALLPSIQQRL LQRGFEITAQ ARDSERMLSL
ADNGLFLPYE EKDRAGLQLF DGTGAPLFAA QFPGRVYDDF DAIPPLVVNS LLFIEDRYLL
DPNQPNRNPA IDWGRFSRAL ADQGVRVFNH HQSQPGGSTL ATQIEKFRHS AGGRTATPPE
KLRQIASASV RAYLNGPQTM PARQQIVVHY LNSVPLAAQP GIGEINGIGD GLAAWYGRDF
NDVNRVLIAP STEQNLPEQG IAFRQVLSLM IAQRAPSYFL HHGYKELERL TDSYLRLLAN
GGIVSVPLRD AALSAVVDLQ RAPVKTASAD SFVSRKAVTS MRSHLLAALN IPSFYELDRL
DLQANGTLNN AVQQAVSDRL AAAATRDGAK AAGLVGFEML RASDDPSRIA YSFTLFERRD
GANLVRVQTD SVNQPFDINS GARLNLGSTA KLRTVVTYLQ IVSDLHKRYA PLSTAELKAV
KYDPNDQLTR WSLDYFAHTS DRSLQAMLDA AVERKYSASP GETFYTGGGA QTFNNFESDD
NSRILTVHRA FQHSVNLVFV RLMRDIVHYE MVQTTGPSAQ WLGDPEMRKM YLTRFADQES
RVYMNRFYTK YHGKTPDQAL SLLLLGVRKS PPKVATVLRS VAPDESNAWF NLKMRAALKN
TPAASVLDDE DLANLYAKYA IDRFNLNDRG YISSVHPLEL WTLNYLREHP DATLEQIQSA
SREVRLSTYS WLFKTRYHAT QDRRIKRMVE LRAYDAIGKS WQALGYPFAT LTPSYAAAIG
ASGDRPAALA QLIGVVANNG NKVPTESLTQ LDFAKDTPYE THFKRAAVAP EPQLSPEIAS
TVKVLLRDVV TGGTAKRLAQ GMTFPDGQTL EVYGKTGTGD QRFNVFAKGA RLIESRKVNR
SATFVFAMGD RFYGTLTAWV HEPYAAHYEF TSALSVQLLK SLAPVLQPLL NETPVKTASV
TKVAAQ
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