| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4419 |
|---|
| Symbol | |
|---|
| ID | 6278374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 482477 |
|---|
| End bp | 483664 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642615512 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001888165 |
|---|
| Protein GI | 187919134 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATC AACGAGAAGT AGTGATCTGC AATCCGGTGA GAACGCCGAT CGGCGCGTTC
GGCGGGGCAT TGAAGGAGGT GCCCGCGACT ACGCTCGGCG CGGTCGCCGT GCGTGAGACG
TTGCGCCGCA GCCGGCTCGA CGCGGCCGAG TTGGCGTCGG TCGTGATGGG CAATGTGATT
CAGGCCGGCA ACAAGATGAA TGCGGCGCGC CAGGCGTCGA TCGGCGGCGG TGTGCCGGTG
GCCGTGCCGG CGTTGACGGT CAATCGCGTA TGCGGCTCGG GCGCGCAGGC GATCGCGTCG
GCGGCCCAGG AAATTCTGCT AGGTTTGGGC GACGCGGCCG TGGCCGGCGG CATGGAAAAC
ATGGACCGCG CGCCGTATCT GCTCGACGGC GGCCGCTGGG GCTACCGCAT GGGCAACGCG
CAGATCCACG ACAGCCTGTT GCGCGACGGC CTTAACGATG CGTTTTCCGG CGAGCATTCG
GGTTGGCATA CGGAAGACCT CGTCGCGCAA TTCGATATCA CGCGTGAAAC TCAGGACCGT
TGGGCCGCGC GTTCGCAGCA GCGCTTCAGC GAAGCCCAGG CGCGCGGCGA TTTCGACGCC
GAACTGGTTG GCGTGGAAAT AGCCGGGCGC AAAGGCCCGC AGCATTTCAC GCGCGATGAA
CAACCGCGTC CCGACACCAC GGTGGAAACG CTCGCGAAAC TGCGTCCGGC ATTTCGCCCC
GACGGCACGA TCACCGCGGG CAACGCGCCC GGATTGAACA GCGGCGCAGC CGCGATGCTG
GTGGCCGAGC GGGGTTTCGC GGAAGCACGC GGCATCGCGC CGCTCGCGCG TCTCGTGTCG
TATGGCGTCG CCGCGGTCGA ACCCGGCATG TTCGGCCTCG GTCCCGTTCC GGCGGTGCAG
ATGGCATTGG CGCGAGCCGG TTGGCAACTG CACGATGTCG AGCGTTTCGA GATCAACGAA
GCGTTTGCCG CCGTGCCGAT CGCGGTCGCG CGCAAACTCG GCATTGCGGA CGAGTTGATT
AACGTGCGAG GCGGCGCAAT CGCGCATGGT CATCCGATCG GCGCAACGGG CGCCGTGCTG
ACCACGCGCC TGCTTCATTC GATGCAGCGC GATGGGATCA AACGCGGCAT CGTGACGTTG
TGCATTGGCG GCGGTCAGGG CATCGCGTTG GCATTGGAAA TGCTGTGA
|
|---|
| Protein sequence | MANQREVVIC NPVRTPIGAF GGALKEVPAT TLGAVAVRET LRRSRLDAAE LASVVMGNVI
QAGNKMNAAR QASIGGGVPV AVPALTVNRV CGSGAQAIAS AAQEILLGLG DAAVAGGMEN
MDRAPYLLDG GRWGYRMGNA QIHDSLLRDG LNDAFSGEHS GWHTEDLVAQ FDITRETQDR
WAARSQQRFS EAQARGDFDA ELVGVEIAGR KGPQHFTRDE QPRPDTTVET LAKLRPAFRP
DGTITAGNAP GLNSGAAAML VAERGFAEAR GIAPLARLVS YGVAAVEPGM FGLGPVPAVQ
MALARAGWQL HDVERFEINE AFAAVPIAVA RKLGIADELI NVRGGAIAHG HPIGATGAVL
TTRLLHSMQR DGIKRGIVTL CIGGGQGIAL ALEML
|
|---|
| |