Gene Bphyt_4409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4409 
Symbol 
ID6278923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp473096 
End bp473845 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID642615502 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001888155 
Protein GI187919124 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACGG AACAAGGTGT GACAGGTGCT GAACGGGTGC TGCTCGTGCT GGCGGCGCTC 
GCCAGTCACG GTAAGGCCAT GTCGGTGAAA GAGCTGCTGG CTGTCACCGG ACTCGCGCAA
AGCACCTTGT ACCGGCAGAT CGCCTTGCTC AAGCGCTGGG GCTTCGTCGC GGAGAACGCG
GGGCATTACG CGCCGGGCCC CATTAGCCTG CAGTTGGCGC TGGGCTTCGA CGTCAATTCG
CTGCTGGTCG AAGCGAGCCG CAGCGAGATG CAGCGGCTCG CGCGAGCATC GCAGGAAAGC
ATTGGACTGG TGGTCGCCGT TAAACATCAG GTGATGTGTC TGGAGATGGT CGACAGCCAG
CACTCGCTGC GCTGTTCGTT CGAGAAAGGA CGCGCCGTGG CGCTCAAGGC GGGTGCGTCG
GCGAAGTCGC TGCTCGCGTT CATGGCCGAC AAGGCACGCA CCGAAGTACT CGACAACCTG
TTCAATGACG ATCCGGCCGG CCGCGTGGCA ATCGAAGCCC GGTTGGAGCA GATTCGCGCC
CAAGGCTACG CAGTCAGCGA CAGTGAAGTG GATCCGGGTG TCTGGGGTGT GAGCGCCCCG
ATATTCCATC GCAGCGGACG CGGCGCCGGC AGCGGCGCGT CGATCACGCT GATGGCGCCG
TCCACGCGCG CCGTCGGCCG CGAAAGCCAA TTCATCGACG GGACGCTACG TACGGCCCGC
GCCATTTCCG AGCGTATGCA AACCGATTGA
 
Protein sequence
MNTEQGVTGA ERVLLVLAAL ASHGKAMSVK ELLAVTGLAQ STLYRQIALL KRWGFVAENA 
GHYAPGPISL QLALGFDVNS LLVEASRSEM QRLARASQES IGLVVAVKHQ VMCLEMVDSQ
HSLRCSFEKG RAVALKAGAS AKSLLAFMAD KARTEVLDNL FNDDPAGRVA IEARLEQIRA
QGYAVSDSEV DPGVWGVSAP IFHRSGRGAG SGASITLMAP STRAVGRESQ FIDGTLRTAR
AISERMQTD