| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4404 |
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| Symbol | |
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| ID | 6280386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 462135 |
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| End bp | 463976 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615497 |
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| Product | putative adhesin processing HmwC-like protein |
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| Protein accession | YP_001888150 |
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| Protein GI | 187919119 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG AATTTTCCCT CGATCGTTTC GAATCCCAAA TCCAGTCCCG TGACTACGAT
GCCGCGCACG AGGAATTCTG CACGCTACTC AGGACGCTGT CCGACAAGCG CGGCAGGCTC
GGCGCCGAAC ACTTCGCCCG CAGCACGCCG AACGCACCCA GTGACGAAAA ATCGCGGGAC
ACCTTGCAGC GCATCGCCGA CGGTTTCACC ACGCTGTTTT CCGCCCCCGA GTATCCGCTC
CAGGCGGAGA AGATGAACAT CATGTTCTGG GGGCGCCCGT GGATCAACAT GATCTTCGCC
GTGACATCGT ATGGATCGAC GGATCACATC GTCCGCAAGC TGCTCGAAAC CGCGGAGGAT
AACGATGAAG CGCGCGCCAT CTTGACCCGC AAGCAACTCG TGCTCTACAC CGCAGGCTCG
CAATACGACA TCGATTTCAC CGACCTCCAC CGGCGCGACC CGGTGCTCGC GACGAGCCTT
GGCGTTTCGA TGGTCAGCGC GGCCGTGCAC ATCTCGCCGG CCGCGCACGA AAAACGCGAA
CGTCTGCTCG AATGGCTGCC GGGCGCGCTC GACAAGATCG AGGACCTCGA CGAGTTGCCG
ACCGCCGCCG TCTGCGGCGC CTACATGCAT TGCAGCTATT CGACATCGCC TGAGCGGCAT
GAGATCAAGC GCAGCATCAA CAGGCTGGTG CGCAAGAAGC TGGACGCGCT CGGCCTGCTC
GGCCACGAGG CCAGCGTCGC CCGCACAGGA ATCAAAGGAC GCAAGCCGGT GATGCTCGTG
GTGCTCGAAT GGTTCTCGGG CGGTCACTCG ATCTATCGGA CCCATTCGCG CACCATGCTC
GCCGCGCGCC AGCATTTTGA AGTGGTCGCG TTCGGCGAGG CGCAGAACGT GGACGAAGCG
GGACGCGCGA TTTTCGATCG CTTCGTCGAA TTCGAGCATC CGGAATATGT CGGCGACTGC
ATCCGCCAGA TCCAGGCGTT CGCCGCACGC GAGCAACCGG ACGTGCTCTA TATGCCGAGC
GTCGGCATGT TCTCGCACAC GATCTTTCTG TCGAACCTGC GCGTCGCGCC GTTGCAGATC
GCAGGCCTCG GTCATCCCGC GACGATGCAC GCGGCGCATA TGGACTACGT GAGCGTGGAG
GACGATTTCG TCGGCGATCC GGCCTGCTTC AGCGAAAAAA TGCTGCGTCT GCCGAAGGAC
GGCCAACCGT ACGTGCCGTC GAAACTGCTC ACCAATGTCG TGCCGTCCGT GCCGGAGCGC
GGCGACGTGG TCAACATCGG CGTGACGGCC AGCGCGATGA AAATCAATCC GCACTTTCTC
GAGACCTGCC AGGCGATCGT TCGCACTGCG CGCGTGCCGG TCAAATTCCA TTTCATGACA
TGCTGGAACG AAAGCATCGA TCTGGCGTAC GTCAGAAAGT CGATCTACGC GACGCTGCCG
GAATCGAGCG TGGACGTGTA CGGCTCGCTC AGCTACCCCG AGTATCTGAA GATCCTCAAC
ACGATGGACA TGTTCGTGAG CCCGTTCCCA TTCGGCAATA CCAACGGCAT CGTCGATTCG
TTCACGATGG GCCTGCCCGG CGTCAACCTG TGCGGACGTG AAGTGTTCGA GCATATCGAC
AGCGGCCTTT TCGAGCGCGC TGGCCTGCCG TCATGGCTCA CAACCTATTC GACCGACGAA
TACGTGCGCG CCGCCGCCCG GCTCGCCGAA CAGCACGACG AGCGCGAAGC GCTGCGCCGG
CGCCTGATCG ACGGGAAAGC GGTCGAGCGG ATCTTCGAGG GCCGTCCCGA AGCGTTCGGC
GAAGGCGTAT TGAAGTTGCT GAACGGTCTC GGCGAAAAGT AA
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| Protein sequence | MSTEFSLDRF ESQIQSRDYD AAHEEFCTLL RTLSDKRGRL GAEHFARSTP NAPSDEKSRD
TLQRIADGFT TLFSAPEYPL QAEKMNIMFW GRPWINMIFA VTSYGSTDHI VRKLLETAED
NDEARAILTR KQLVLYTAGS QYDIDFTDLH RRDPVLATSL GVSMVSAAVH ISPAAHEKRE
RLLEWLPGAL DKIEDLDELP TAAVCGAYMH CSYSTSPERH EIKRSINRLV RKKLDALGLL
GHEASVARTG IKGRKPVMLV VLEWFSGGHS IYRTHSRTML AARQHFEVVA FGEAQNVDEA
GRAIFDRFVE FEHPEYVGDC IRQIQAFAAR EQPDVLYMPS VGMFSHTIFL SNLRVAPLQI
AGLGHPATMH AAHMDYVSVE DDFVGDPACF SEKMLRLPKD GQPYVPSKLL TNVVPSVPER
GDVVNIGVTA SAMKINPHFL ETCQAIVRTA RVPVKFHFMT CWNESIDLAY VRKSIYATLP
ESSVDVYGSL SYPEYLKILN TMDMFVSPFP FGNTNGIVDS FTMGLPGVNL CGREVFEHID
SGLFERAGLP SWLTTYSTDE YVRAAARLAE QHDEREALRR RLIDGKAVER IFEGRPEAFG
EGVLKLLNGL GEK
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