Gene Bphyt_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4393 
Symbol 
ID6279572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp451472 
End bp451903 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID642615486 
Productresponse regulator receiver protein 
Protein accessionYP_001888139 
Protein GI187919108 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGAA CCCCCGCTAC TTGCCAAAGG TGGAGCGCCC GTGAGATCCG GGTATTGCAC 
GAATTACCGC GCGTGCTGGT CGTCGACGAC AACGTCGGCG CGGCCGAAGC GCTCGCCACC
TATCTCTCCT ATGAAGGCGT CGAAGCTCGC GCCGCCGACG GCTGCGAGCA GGCGCTGCGC
TGCGTGCGGG ACTGGGTGCC CGACGTGGTG GTGCTCGACA TCATGATGCC GGAGCGCGAC
GGCTATGAAA CCGCGAGCGC GCTACGCAGC TATCTGCCGA CGCAAAGTCT GGGCATCGTC
GCGTTCACCT CGCTCGATGA GGATCACGTG AAGGAAACCG GCAAGGCACG TCACAATTTC
GACGGTTATT GTCAAAAAGG CACGGCCCCG ACCGCGTTGC TCGCGCTGAT GCGCAAGCTT
TGGCGCGAAT AG
 
Protein sequence
MPRTPATCQR WSAREIRVLH ELPRVLVVDD NVGAAEALAT YLSYEGVEAR AADGCEQALR 
CVRDWVPDVV VLDIMMPERD GYETASALRS YLPTQSLGIV AFTSLDEDHV KETGKARHNF
DGYCQKGTAP TALLALMRKL WRE