Gene Bphyt_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4347 
Symbol 
ID6278240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp401818 
End bp402390 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID642615441 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001888094 
Protein GI187919063 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT CGAGGGTCGA AACCGCCGAA ACCCGGCAGC GAATCGTCGA CGTGGCAGCG 
CGCAAGTTTC AGCTCAACGG CATTAGCGCG ACGGGCTTGG CCGACGTCAT GTCTGAAGCC
GGGCTCACAC ACGGCGGCTT TTACCGGCAT TTCGAATCCA AAGATCAGCT GGTTGCCGAA
GCCTGCGCAA CCGCGGCGAC CAACATCGTC GCCACGCTAG AAGAAGCGGC CAGCGACAGC
GACGTCGAAG AGGGTTTTCG GGCCATCGTC GAGCGATATG TATCGACCGG CCACCGCGAC
AACGTCTCGG GCGGCTGCCC GCTTGCGGGA ATGGGCAGCG AGTTGTCGCA TGGCGACGAG
AACACTCGTG CGGCCGCTTC TCAAGGCTTC CGCGATCTCG TTGAGGTCGT AGCGAAGCGA
CTGGATCCGC AGCGGTCTGA GGCGACGGAG TCGAAGGCCG TCTTTGCGGT AACGGCGATG
ATCGGCGCCA TCACCATGTC CCGGATTCTT ACGGACAGCG ACGCCTCGGC ATCGGTTCTG
CAGCAAGTCA AACAACATCT CGACGCGATC TAG
 
Protein sequence
MRKSRVETAE TRQRIVDVAA RKFQLNGISA TGLADVMSEA GLTHGGFYRH FESKDQLVAE 
ACATAATNIV ATLEEAASDS DVEEGFRAIV ERYVSTGHRD NVSGGCPLAG MGSELSHGDE
NTRAAASQGF RDLVEVVAKR LDPQRSEATE SKAVFAVTAM IGAITMSRIL TDSDASASVL
QQVKQHLDAI