Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4333 |
Symbol | |
ID | 6279209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 389675 |
End bp | 390883 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615427 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001888080 |
Protein GI | 187919049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.782262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC GCGCAGGATG GATCTCTCGC CTCATGGTGC CAACGGTGCT CTCGCTCGCC GCCTTGAGTG CGAGCGCACA GCAGACCATC AAGATCGGCG AGATCAACAG CTACAAGGCG CAGCCCGCCT TTCTCGGGCC TTACAAGAAC GGCTGGAATC TCGCGCTCGA CCAGGTGAAC GCCGCGGGCG GCGTGCTCGG CAAACAGCTC GAAGTGGTGT CGCGCGATGA CAATGGCAAT CCGGGCGACA CGATTCGCGT CGCGCAGGAA CTGATCGCGC GCGAGCAGGT GCAATTGCTG TTCGGCGGCT TTCTCTCGAA CACCGGCCTC GCGCTGACTG ACTTCGCCAA GCAGAAGAAG ATTTTCTTCC TCGCCGCCGA GCCGCTGACC GACAAGATCG TCTGGGCCGA TGGCAACAAA TACACGTACC GTCTGCGGCC TTCGACGTAT ATGCAGGTGG CGATGCTGGT GCCGGAAGCC GCCAAGCTGC ATAAGAAGCG CTGGGCACTC GTGTATCCGA ACTACGAGTA CGGGCAATCG GCGGTGGCGA CCTTCAAGAA GCTGCTGACG GCGGCGCAGC CTGACGTGCA GTTCGTCGCC GAGCAGGCCA CGCCGCTCGG CAACGTCGAC GCGGGCGCGG TGACGCAGGC GATCGCCGAC GCCAAGCCGG ATGCGATCTT CAACGTGCTG TTCGGCGCCG ACCTCGGCAA GTTCGTGCGT GAGGGCAATA CTCGCGGGCT CTTCAAGGAT CGCAGCGTGG TGTCGCTGCT GACGGGCGAG CCGGATTATC TCGACCCGCT AGGCGCCGAA GCGCCGACCG GCTGGATCGT GACGGGCTAT CCGTGGTACT CGATCGATAC CGCAGCCAAC AAGAAGTTCG TCGATGCGTA TCAGGCCAAG TATCACGACT ATCCGCGGCT CGGCTCGGTG GTGGGGTATT CGGCGTTGAT GTCGATTGCA GCGGGCATCA AGAAGGCGGG GTCGGTCGAT CCGGATAAGC TCGCCGCCGC GTTCAAGGGC CTCGGTGTGG ACACGCCGTT CGGGCCGATC ACCTATCGCG CGCAGGACAA TCAGTCGACC ATGGGCGCGT ATGTCGGCGT GACGGGTTTG AAGGACGGCA AGGGCGTGAT GACCTCGTAC CGGTATATCG ATGGCGCGAG CGTTCAGCCC TCGGATGCCG AGGTCAAGAA GCTGCGGCCT GCCGAGTAA
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Protein sequence | MTTRAGWISR LMVPTVLSLA ALSASAQQTI KIGEINSYKA QPAFLGPYKN GWNLALDQVN AAGGVLGKQL EVVSRDDNGN PGDTIRVAQE LIAREQVQLL FGGFLSNTGL ALTDFAKQKK IFFLAAEPLT DKIVWADGNK YTYRLRPSTY MQVAMLVPEA AKLHKKRWAL VYPNYEYGQS AVATFKKLLT AAQPDVQFVA EQATPLGNVD AGAVTQAIAD AKPDAIFNVL FGADLGKFVR EGNTRGLFKD RSVVSLLTGE PDYLDPLGAE APTGWIVTGY PWYSIDTAAN KKFVDAYQAK YHDYPRLGSV VGYSALMSIA AGIKKAGSVD PDKLAAAFKG LGVDTPFGPI TYRAQDNQST MGAYVGVTGL KDGKGVMTSY RYIDGASVQP SDAEVKKLRP AE
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