Gene Bphyt_4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4333 
Symbol 
ID6279209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp389675 
End bp390883 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID642615427 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_001888080 
Protein GI187919049 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.782262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC GCGCAGGATG GATCTCTCGC CTCATGGTGC CAACGGTGCT CTCGCTCGCC 
GCCTTGAGTG CGAGCGCACA GCAGACCATC AAGATCGGCG AGATCAACAG CTACAAGGCG
CAGCCCGCCT TTCTCGGGCC TTACAAGAAC GGCTGGAATC TCGCGCTCGA CCAGGTGAAC
GCCGCGGGCG GCGTGCTCGG CAAACAGCTC GAAGTGGTGT CGCGCGATGA CAATGGCAAT
CCGGGCGACA CGATTCGCGT CGCGCAGGAA CTGATCGCGC GCGAGCAGGT GCAATTGCTG
TTCGGCGGCT TTCTCTCGAA CACCGGCCTC GCGCTGACTG ACTTCGCCAA GCAGAAGAAG
ATTTTCTTCC TCGCCGCCGA GCCGCTGACC GACAAGATCG TCTGGGCCGA TGGCAACAAA
TACACGTACC GTCTGCGGCC TTCGACGTAT ATGCAGGTGG CGATGCTGGT GCCGGAAGCC
GCCAAGCTGC ATAAGAAGCG CTGGGCACTC GTGTATCCGA ACTACGAGTA CGGGCAATCG
GCGGTGGCGA CCTTCAAGAA GCTGCTGACG GCGGCGCAGC CTGACGTGCA GTTCGTCGCC
GAGCAGGCCA CGCCGCTCGG CAACGTCGAC GCGGGCGCGG TGACGCAGGC GATCGCCGAC
GCCAAGCCGG ATGCGATCTT CAACGTGCTG TTCGGCGCCG ACCTCGGCAA GTTCGTGCGT
GAGGGCAATA CTCGCGGGCT CTTCAAGGAT CGCAGCGTGG TGTCGCTGCT GACGGGCGAG
CCGGATTATC TCGACCCGCT AGGCGCCGAA GCGCCGACCG GCTGGATCGT GACGGGCTAT
CCGTGGTACT CGATCGATAC CGCAGCCAAC AAGAAGTTCG TCGATGCGTA TCAGGCCAAG
TATCACGACT ATCCGCGGCT CGGCTCGGTG GTGGGGTATT CGGCGTTGAT GTCGATTGCA
GCGGGCATCA AGAAGGCGGG GTCGGTCGAT CCGGATAAGC TCGCCGCCGC GTTCAAGGGC
CTCGGTGTGG ACACGCCGTT CGGGCCGATC ACCTATCGCG CGCAGGACAA TCAGTCGACC
ATGGGCGCGT ATGTCGGCGT GACGGGTTTG AAGGACGGCA AGGGCGTGAT GACCTCGTAC
CGGTATATCG ATGGCGCGAG CGTTCAGCCC TCGGATGCCG AGGTCAAGAA GCTGCGGCCT
GCCGAGTAA
 
Protein sequence
MTTRAGWISR LMVPTVLSLA ALSASAQQTI KIGEINSYKA QPAFLGPYKN GWNLALDQVN 
AAGGVLGKQL EVVSRDDNGN PGDTIRVAQE LIAREQVQLL FGGFLSNTGL ALTDFAKQKK
IFFLAAEPLT DKIVWADGNK YTYRLRPSTY MQVAMLVPEA AKLHKKRWAL VYPNYEYGQS
AVATFKKLLT AAQPDVQFVA EQATPLGNVD AGAVTQAIAD AKPDAIFNVL FGADLGKFVR
EGNTRGLFKD RSVVSLLTGE PDYLDPLGAE APTGWIVTGY PWYSIDTAAN KKFVDAYQAK
YHDYPRLGSV VGYSALMSIA AGIKKAGSVD PDKLAAAFKG LGVDTPFGPI TYRAQDNQST
MGAYVGVTGL KDGKGVMTSY RYIDGASVQP SDAEVKKLRP AE