Gene Bphyt_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4328 
Symbol 
ID6279329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp382634 
End bp383443 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID642615422 
ProductABC transporter related 
Protein accessionYP_001888075 
Protein GI187919044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.233197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGC TGCGCGTTTC TGGCCTCTGC AAATCGTTTG GCGGACTCAA GGCGGTGGAC 
GATGTCTCGT TCGATCTCGA AGCCGGCCAA TTGCTTGCCT TGCTCGGACC GAACGGCGCC
GGCAAGTCGA CCTGTTTCAA CATGGTCAAC GGACAGCTGC CGCCTTCGTC AGGATCGATC
CGTCTCGACG GTCAGGAACT GGTCGGCATG CGTCCGCGCG ATATCTGGCG ACTGGGCGTG
GGCCGCACGT TTCAGATCGC CGCGACTTTC AATTCCATGA CCGTGATCGA GAACGTGCAA
ATGGCGCTGG TCTCGCGCGA ACGCAAAACC TTCGGTCTAT GGAAACCCGC CGGCGCGCGC
TACGCCGACG AAGCCCTCGC GCTGCTCGAC CAGGTGGGTA TGGCGTCGGA CGCGCACCGC
GCTTGCGGCG TGCTCGCTTA TGGCGACGTG AAGCGTGTCG AACTCGCGAT CGCGCTCGCC
AACCGCCCGA AGCTGCTGCT GATGGACGAA CCCACCGCCG GCATGGCGCC GAAGGAGCGC
AATGAATTGA TGGCGCTGAC CAAACGCCTC GTCACCGAAC ACAAGATCGG CGTGCTGTTT
ACCGAACACA GCATGGACGT CGTATTCGCC TACGCCGATC GACTGATCGT GCTCGCGCGC
GGCAAGCTGA TCGCCGAAGG CGACGCCGAC ACCATTCGCA ACGACCCGCG CGTGCAGGAA
GTCTATTTCG GCACCGGCAA GACCTTCCAG CCGCACGCGC CGCTGCACGA CGCAGCGGGC
GGCCATCAGG GACAAGGAGC GTTGCAATGA
 
Protein sequence
MSLLRVSGLC KSFGGLKAVD DVSFDLEAGQ LLALLGPNGA GKSTCFNMVN GQLPPSSGSI 
RLDGQELVGM RPRDIWRLGV GRTFQIAATF NSMTVIENVQ MALVSRERKT FGLWKPAGAR
YADEALALLD QVGMASDAHR ACGVLAYGDV KRVELAIALA NRPKLLLMDE PTAGMAPKER
NELMALTKRL VTEHKIGVLF TEHSMDVVFA YADRLIVLAR GKLIAEGDAD TIRNDPRVQE
VYFGTGKTFQ PHAPLHDAAG GHQGQGALQ