| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4327 |
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| Symbol | |
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| ID | 6279300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 380697 |
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| End bp | 382637 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615421 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001888074 |
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| Protein GI | 187919043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0490651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCGA ATTTGCTGGT TCAACTGGTC AACGGACTCG CCGACGCGTC GACGCTGTTT
CTCGTCGCCG CCGGTTTGTC GCTGATCTTC GGCGTGACGC GCATTGTCAA CTTTGCGCAC
GGCTCGTTCT ATATGTTCGG CATCTATGTG GCGTACAGCA TCGCGAGCCG CTTCGGACAT
ACGACGGGCG GCTTCTGGTT GTCGGTGCTG GCGGCGGCGC TGGTGGTCGC GGTGCTGGGC
GCGCTGGTCG AGATGGTGGT TCTGCGGCGC ATCTATCAGG CGCCCGAGTT GTTTCATCTG
CTCGCCACCT TCGCGCTGGT GCTGATCTTT CGCGATGCCG CGCTGTGGCT GTGGGGTCCG
GAAGACCTGT TCGGACCACG CGCGCCGCAT CTGGCGGGCG CGGTGGATTT CCTCGGCCAT
CCGTTGCCGA CCTACGACAT CGCGTTGATC GTGATCGGGC CGGTGGTGTT GCTGCTGCTC
TGGTACGCGC TGACACGCAC GCGCTGGGGC ACGCTGGTGC GCGCCGCAAC GCAGGATCGC
GAGATGCTCG GCGCGCTCGG TATCAATCAG GCGTGGCTGT TTACAGGCGT GTTTTTCGTC
GGCGCGTTTC TCGCCGGTCT TGGCGGTGCG CTGCAAGGAC CGCGCATGTC GGCGAATCTA
TCGCTGGATC TGGAGACGAT CGGCAACGCG TTCGTCGTGG TCGTGGTCGG CGGCATGGGC
TCGATTCCGG GGGCGTTCAT TGCCGCGCTG ATCATCGCGG AGATCAAGGC GCTGTGCATC
GGCATCGGCC ATGTGACGAT CTTCGGCGTC GGGTTGTCGT TGAGCCGCTT CACGCTGGTA
GCGGAATTCG TCGTGATGGC GGTCGTGCTG GTGGTGCGTC CGTGGGGCTT GCTCGGCCGC
GCGAGCGCCG CGGTGCGCGG CATGGCGGCG CCGGAAACGC CTTTGCGTCC GGCGGGCAAA
CGTCTCAAGT GGCTGGCCGC TATCGCTTTG CTGGTGCTCG TGCTCGCGCC GTTGGCGGCC
AACGCGTTTC CGTACATGCC CGTGCTGCTG GTCGAGATCC TGATCGCCGT GCTGTTCGCC
ACAAGCCTCC ATTTCATCAT GGGACCGGGC GGCATGCATT CGTTCGGCCA CGCTGCGTAC
TTCGGCTTGG GCGCATACGG CGCCGCGCTG TTCCTCAAAG TGCTGAATCT GCCGATGGAA
GCCGCCTTGC TGCTCGGCCC GCTTTTGGCC GTGGCCGGCG CGCTGGTGTT CGGCTGGTTC
TGCGTGCGCC TGTCCGGCGT GTATCTCGCG ATGCTGACGT TAGCGTTCGC GCAGATCGTC
TGGTCGGTCG TGTTCCAGTG GGACGACGTG ACGGGCGGCA GCAACGGCAT TCTCGGGTTG
TGGCCGTCGA ACTGGTTGTC CTCCCCGGTG GCCTTCTATT ATGTGACGCT CGTCTGCGCT
GTGATCGGCG TGTGGCTGTT GCGCAAGATG CTGTTCTCGC CGCTGGGTTA CGCGATGCGT
GCGTCGCGTG ATTCGGTGCT GCGCGCCGAG GCGATCGGCA TCGACGTGAA GCGCGTGCAA
TGGGCCGCGT TCGTGATCGC GTCGCTGTTC TGCGGGCTCG CCGGTTCGCT GTATGCGTTC
TCCAAGGGCA CGATTTCGCC GGAAGTGATC AGCGTGAGCC GTTCCGTGGA CGGTCTCGTG
ATGGTGTTGC TCGGCGGTTT GCAGACGCTC ACCGGGCCAA TCGTGGGCGC GGCTGTGTTC
ACGTGGTTGC AAGACACGGT CGCGCGCCAG ACCGACTATT GGCAGGCGCT GCTGGGCTTC
GCGATCCTGC TGCTGGTAAT TGCGTTTCCG CAGGGAATCG TCGGCTTCAT TCGCGAGCGT
TTCGGCGACG ACAGTGCCGA TTCCGCGGAC AAGAGCGCCG TCTCACCTTC CCGACGCGCC
GCGATCAAGG AGGGGCTATG A
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| Protein sequence | MLSNLLVQLV NGLADASTLF LVAAGLSLIF GVTRIVNFAH GSFYMFGIYV AYSIASRFGH
TTGGFWLSVL AAALVVAVLG ALVEMVVLRR IYQAPELFHL LATFALVLIF RDAALWLWGP
EDLFGPRAPH LAGAVDFLGH PLPTYDIALI VIGPVVLLLL WYALTRTRWG TLVRAATQDR
EMLGALGINQ AWLFTGVFFV GAFLAGLGGA LQGPRMSANL SLDLETIGNA FVVVVVGGMG
SIPGAFIAAL IIAEIKALCI GIGHVTIFGV GLSLSRFTLV AEFVVMAVVL VVRPWGLLGR
ASAAVRGMAA PETPLRPAGK RLKWLAAIAL LVLVLAPLAA NAFPYMPVLL VEILIAVLFA
TSLHFIMGPG GMHSFGHAAY FGLGAYGAAL FLKVLNLPME AALLLGPLLA VAGALVFGWF
CVRLSGVYLA MLTLAFAQIV WSVVFQWDDV TGGSNGILGL WPSNWLSSPV AFYYVTLVCA
VIGVWLLRKM LFSPLGYAMR ASRDSVLRAE AIGIDVKRVQ WAAFVIASLF CGLAGSLYAF
SKGTISPEVI SVSRSVDGLV MVLLGGLQTL TGPIVGAAVF TWLQDTVARQ TDYWQALLGF
AILLLVIAFP QGIVGFIRER FGDDSADSAD KSAVSPSRRA AIKEGL
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