| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4299 |
|---|
| Symbol | |
|---|
| ID | 6279417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 348294 |
|---|
| End bp | 349058 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642615393 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001888046 |
|---|
| Protein GI | 187919015 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1213] Predicted sugar nucleotidyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.293361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.44964 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCCA TCATTCTCGC TGCGGGCCTC GGCCTGCGTC TCCAGCAACC GCCGGAAGCT
CAGTTCCCGA AGTGTCTGTT GCAATTCGAC GGCATGAGCC TGCTCGAACG GCATCTGCAA
ATGCTCGAAA CCGCCGGCGT GACGGAAGTC GTGCTGGCGC TCGGCTTTCA GCCGGAATCG
GTGCAGGCGG AACTGGAGCG CATCAACTGG CCGCATCAGG TGGAAACGGT GTTGAACACG
CGTTACGACC TGGGCAGCGT GCTGACGGTG CACACGGTGG CCGATGCGTT GACGCGCGGC
GGCGACGTGC TGCTGATGGA CGCCGACGTG CTCTACGACG AGCGCATTCT GGCTGCTTTG
GTGGCGGGCG AGACGGTCAA CCGCCTGTTG ATCGACCGTG ATTTCGAAGC CGGCGACGAA
CCCGTCAAGC TGTGTCTGAA AGACGGCGTG CCGGTCGAGT TGCGCAAGCA GCTCGCGGTC
AATCTCGAGT ACGACACCAT CGGCGAGTCG GTCGGGTTCT TCCGCTTCCG CCAGGAGACC
GCGCAACGCT TTGCGCAGAT CGTGGCCGGC TATGTGGACA GCGGCCGCGC CAACCTGCCG
CACGAAGAAG CGGTGCGCGA TCTGCTGCTG GAACGTAGCC AGGTGTTCGA TACCGCCGAC
GTGACCGGTG CACCGTGGAT CGAGATCGAC TTCCCGAACG ACGTGGCTCG CGCAAGCACC
GAGATTCTGC CGCAGTTGCA GCCGCTGGTC AGCGCATCGC GCTAA
|
|---|
| Protein sequence | MRAIILAAGL GLRLQQPPEA QFPKCLLQFD GMSLLERHLQ MLETAGVTEV VLALGFQPES
VQAELERINW PHQVETVLNT RYDLGSVLTV HTVADALTRG GDVLLMDADV LYDERILAAL
VAGETVNRLL IDRDFEAGDE PVKLCLKDGV PVELRKQLAV NLEYDTIGES VGFFRFRQET
AQRFAQIVAG YVDSGRANLP HEEAVRDLLL ERSQVFDTAD VTGAPWIEID FPNDVARAST
EILPQLQPLV SASR
|
|---|
| |