| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4282 |
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| Symbol | |
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| ID | 6277353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 331540 |
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| End bp | 332478 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615376 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001888029 |
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| Protein GI | 187918998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.377243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG ATCATCGCGC GACGCAGCCT TCGTGGTCCG CGTCCACATC GAACGATCAC
GACGACGGCG CGCGCGAGCC GGAAAGGCGC ACCGGTCACA CCCGGCAGCG CACCAGCGTG
CCCGGCCGCA TCTGGCGCGT GCTGGTGTGG GGCGCGATGG TGTTCTTTCT CGTCAACGTG
GTGCTGCTGA TCGCGACCGT CGCGGTCAAT TCGATCGCGA CGCGCTGGTT CGGCACCTTG
CTGCCGCAAG GCTTCACGCT GCATTGGTAT GCGCAGGCGT GGAGCGATTT CCAGTTGGCG
AGTGTGTTGT GGGTGACCGT CGAAGTGGTC GGCGCAGTCG TGCTGCTGTC GGTCCTGCTC
GGCGTGCCGG CGGCTTATGC GCTCGCGCGC GTGCAATTTC CCGGCAAGCG CATCGCGATG
CTGATTTTCC TGTTGCCGCT GATGGTGCCG CCTGTCACGT ACGGCATTCC CATGGCGACG
GTCATGTACA AGGTCGGCCT CGCCGGCACG CTGAGTGGCG TGATTCTGGC CAACCTCGTG
CCGGCGTTGC CGTTCGTGAT TCTCGTGATG ACGCCCTTCA TTGAACAGAT CGATCCGAAT
CTCGAAGCGG CGGCGCGTAT TTTCGGCGCC AACACGTTTC GCTATTTCCG CTATGTGCTG
CTGCCGTTGC TCGTGCCCGG CATGCTGGCC GCGGGCTTGC TGGTGCTGGT GCGCACCATC
GGCATGTTCG AGCTGACTTT TTTCACCGCG GGCCCCGCGA CGCAAACGCT CGTGGTCGCG
CTGTACTACG CTGTCTTTTC AACCGGCGTG CGCGCGCCGC AATCGATCGA TGCGATGGCG
ATGATCTATA TGGCGATCAC GCTGATCTGG GTGCTGATCG CACTGCAATT CGTGAGCCCG
ACGCAGATCG TGTCGCGCGT GAAGGAACAG AAGCGCTGA
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| Protein sequence | MTTDHRATQP SWSASTSNDH DDGAREPERR TGHTRQRTSV PGRIWRVLVW GAMVFFLVNV
VLLIATVAVN SIATRWFGTL LPQGFTLHWY AQAWSDFQLA SVLWVTVEVV GAVVLLSVLL
GVPAAYALAR VQFPGKRIAM LIFLLPLMVP PVTYGIPMAT VMYKVGLAGT LSGVILANLV
PALPFVILVM TPFIEQIDPN LEAAARIFGA NTFRYFRYVL LPLLVPGMLA AGLLVLVRTI
GMFELTFFTA GPATQTLVVA LYYAVFSTGV RAPQSIDAMA MIYMAITLIW VLIALQFVSP
TQIVSRVKEQ KR
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