Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4268 |
Symbol | |
ID | 6279827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 317481 |
End bp | 318581 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642615362 |
Product | hypothetical protein |
Protein accession | YP_001888015 |
Protein GI | 187918984 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4692] Predicted neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.168613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTGGC AAAAAATGTC ATTTTTGCGA CACGTATCTT TCGTTATCCT TTCCTTCTTA TCCGTACAAT CGTCTGCAAA AAGCGGAAAT AATTCTGATG CGATCGTATC CACGGAAGTC GTAAATCCTC CGCAGAACAT TGCGTTTTGT CATGCTTCGA CGGTCGCATT TTCGCAAGGC CATTTGGTGG CGGCATGGCT GGCCGGCAGC AAAGAAGCGG CGAACGACGT TGGTGTCTGG GTGGCGCGCT TCTCTGGCAA TCAATGGAGC CCGCCTGTGC GCGTCGCAGA CGGTCGCTCG CCTGACGGTG AAGCGCTGAC GGTAATTAAC CCCATTCTCT TTTCGCCCAA ACGCGGTCCT TTGATGTTGT TCTACAGGCG AGGGAAACTG CCAGCTGATT GGCATCCTCT GCGGATGACC TCGCTTGACG GCGGCGCCAC ATGGACGAAA CCCGTTGCTC TTGACCCAGG TATCTCTGGG CCGGCGAAAG ACAAGCCCGT CGAGTTATCA AATGGAGTCG TGATAGCAGG AAGCAGCACC GAGTATGACG GATGGAAAAT CCACTTCGAG CGTTCCATGG ATGGCGGCAA TACGTGGCAT GTCGTGTACC CGGCGGTCGG GCTACCTACG GTTCAAGCGA TCCAGCCCAC AATTCTTGAC CATCGTCACG GGCAGTTGCA GGCGCTAGTT CGAACGAAAA GCGGCTTTGT ATTCAGCACC AAGTCGAGCG ATTGGGGGAA GACGTGGAGT GCTCTCGCGC GGTTAGATAT TCCTAACTCA AATTCTGGTC TGGACGCGGT GACCTTGACT GACGGCCGCG ACCTGATCGT CACGAATCCT CTGCCTTACG TCGAAGGTCG TTGGGACCGA CACAAGCTGT CTGTCTTGAT CTCGGCAGAC CATCAGACTT ATCGCGACGT GTTGGACCTT GAGAACGAGG CGGGTCAGGA GTTTTCGTAT CCCGCAGTAA TTCAGTCCCC GGACGGGATG GTTCACATTA CCTACACATG GAAAAAGATT TATATCAAGC ATGTCGTGCT TGATCCGAAG CGAATCTACG CGTCCCGTTC AACGCTGTCA GCCGCGACCG GCCATCAATA G
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Protein sequence | MTWQKMSFLR HVSFVILSFL SVQSSAKSGN NSDAIVSTEV VNPPQNIAFC HASTVAFSQG HLVAAWLAGS KEAANDVGVW VARFSGNQWS PPVRVADGRS PDGEALTVIN PILFSPKRGP LMLFYRRGKL PADWHPLRMT SLDGGATWTK PVALDPGISG PAKDKPVELS NGVVIAGSST EYDGWKIHFE RSMDGGNTWH VVYPAVGLPT VQAIQPTILD HRHGQLQALV RTKSGFVFST KSSDWGKTWS ALARLDIPNS NSGLDAVTLT DGRDLIVTNP LPYVEGRWDR HKLSVLISAD HQTYRDVLDL ENEAGQEFSY PAVIQSPDGM VHITYTWKKI YIKHVVLDPK RIYASRSTLS AATGHQ
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