Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4252 |
Symbol | |
ID | 6279214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 298832 |
End bp | 300139 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615348 |
Product | Radical SAM domain protein |
Protein accession | YP_001888001 |
Protein GI | 187918970 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0238128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCGA TGACCGATCG TGACTGGCTG GATTTCCTGG CCGCCCGTCG CAACGGCGAC GACCCGTCTG CACTATTGAG CGCGGCGTCC GCCCCTGTGC GTTTCATTCT GTCGCGCCAT CTGGAAGGCG CGGAGATTTC CCGCGACGAA GGACGAGTCC TGTTCGAGGC CGATGGCGAA GACCTCAAGG CGGTGGTCGC CACCGCCGAC CATGTACGGC GCGAGCGCGT TGGCGACGTC GTCAGCTTTG TGGTCACCCG CAATATCAAC TTCACCAACG TCTGCTACAT GGGGTGCCGC TTCTGCGGCT TTGCCAAGCG GCGCGAGGAG GAGGGCGCGG AACTGCTGTC GATGGACGAA GTGGCAAGGC GCGCGGATGT GGCCAGGCAG CGCGGCGCCA CCGAGGTCTG TATCCAGGGT GGACTGCATC CAGACCTGAC GGATCACCAT TATCTCGACA TCCTCGCGGC GATCAAGGCG CGAGTGCCCG AGATGCATAT CCACGCATTC TCGCCGTTCG AGATATGGTA CGGCTCGAAA AAGCGCCGCC AGGCGGCCGC CGACTACCTG CGCGAGCTTA AGGCCGCCGG TTTGGGTTCT ATTCCAGGAA CGGCGGCGGA GATTCTCGAT ACCGATGTGC GCCGTCAGCT GACGCGCAAC AAGTTGTCCG CCCAGGCGTG GGTGGAAATC GTCCGTGCCG CGCATGGCGT GGGCCTGCGC AGTACGTCGA CCATGATGTA CGGGCACGTG GATGGGCCCG GCCATTGGGC CGCGCATATC GACCTGCTGC GCAGCATCCA GAAGGAGACT GGGGGCTTCA CCGAATTTGT GCCACTGGGC TTCGTGCACA GCGAGGCGCC GCTGTACATG GAGCACGAGA TCCCTGGCGT GCGTGCCGGT GCCACGCTGG TCGAGCATAT CAAGGTGCAC GCGATCGCCC GCCTGATGCT GGCGGGTTGG ATCGACAACA TTCAGGTGTC GTGGGTCAAG CTAGGACCGC AGACAGGGCA GGCGCTGCTG GCTGCCGGCG CCAACGACTT TGGCGGCACG CTGATGGACG AATCGATCTC CCGGTCGGCG GGCGCGTCGT TCGGGGAGGA AATCACGGCG GCCGAGATGG TGAGCATTAT CCGCGACGCC GGGCGCGAGC CGGTGCGCCG CAGCACGTTG TACGTCCCAC TCGAGCGCTA CGTCGACCAT GATCCGGTGG CGCTGCCGCC GCTGAAGGCG CGTGCCTATG ATCCGATCCG GTTTTTGCGC AACCGGCCGC AGGCAGGATG CGACAACGAG GAGCTCGCTC ATGCGTGA
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Protein sequence | MNAMTDRDWL DFLAARRNGD DPSALLSAAS APVRFILSRH LEGAEISRDE GRVLFEADGE DLKAVVATAD HVRRERVGDV VSFVVTRNIN FTNVCYMGCR FCGFAKRREE EGAELLSMDE VARRADVARQ RGATEVCIQG GLHPDLTDHH YLDILAAIKA RVPEMHIHAF SPFEIWYGSK KRRQAAADYL RELKAAGLGS IPGTAAEILD TDVRRQLTRN KLSAQAWVEI VRAAHGVGLR STSTMMYGHV DGPGHWAAHI DLLRSIQKET GGFTEFVPLG FVHSEAPLYM EHEIPGVRAG ATLVEHIKVH AIARLMLAGW IDNIQVSWVK LGPQTGQALL AAGANDFGGT LMDESISRSA GASFGEEITA AEMVSIIRDA GREPVRRSTL YVPLERYVDH DPVALPPLKA RAYDPIRFLR NRPQAGCDNE ELAHA
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