| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4249 |
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| Symbol | |
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| ID | 6279174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 294653 |
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| End bp | 296158 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615345 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001887998 |
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| Protein GI | 187918967 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC TAGAAACTAT TTCGCACTTT ATCAACGGCC AGCGCACTGC CAGCCTGCGC
AATGCCGAGA CACAGGCTGT GTTCAACCCG GCGCTTGGCG AGGCCGTGGC GCAGGTGGCC
ATGGGCTCGG CAGAGGATAT CCATGCTGCG GTCGGCGCCG CGGCCGCCGC CTTTCCGGCA
TGGTCGGCCC GTCCGCCGCT GGCCCGTGCG CGCATTCTGG CGAAGTATCT GCAACTGATG
CAGCAGCACA CCGATACGCT TGCGCAGATG CTGACGCGCG AACATGGCAA GACGCTGGAC
GACGCCCGAG GTGAAGTGGC GCGCGGTCTC GAGGTGGTCG AGTTTGCGGT GGGCATCCCG
CATCTGCTGA AAGGCGAGTT CAGTGACCAG ATTTCTCGCG GCATCGACGC CTGGTCGATT
CGTCAGCCGC TGGGTGTGGT GGCAGGTATC ACACCGTTCA ACTTCCCGGC GATGGTGCCG
ATGTGGATGT TCCCGATCGC GCTGGCCTGC GGTAACACCT TCGTGCTGAA GCCCTCTGAG
CGCGATCCAT CGTGCTCGCT GTTGCACGCC GAGCTGCTGA AGGAAGCGGG CCTGCCCGAC
GGTGTCTTCA ACGTCGTGCA GGGCGACAAG GCCGTGGTCG ACGCGTTGTT GGACCACCCC
GAGGTGCAGG CGGTCAGCTT CGTCGGCTCG ACTCCCATCG CCGAATACGT GTATGCCCGC
GCCAGCGCGA ATGGCAAGCG GGCGCAGGCG CTGGGCGGCG CGAAGAACCA CCTCGTCGTG
ATGCCGGATG CCGATATGGC CATGGCGACC GACGCGCTGA TCGGCGCGGC CTTCGGTTCT
GCGGGGGAGC GCTGCATGGC GATCTCGGTG GCGGTGGCAG TCGGTGATGT CGGCGATCGT
CTGGTGGCTG CGTTGGCCGA GCGTACCCGC GCGCTGAAGA TTGACGACGG CACCGCGCCA
GGCGCAGAGA TGGGCCCAGT GATCACGGCG GCGGCAAGAG AGCGAATCGA GTCGCTGATC
GGTGCCGGTG TCGCTGACGG CGCCACGCTG GTGGTGGACG GGCGCGATTA CCGCGTGCCG
GGACGTGAAA GCGGCTTTTT CGTCGGCGGC ACGCTGTTCG ACCACGTGAC GCCCGAGATG
ACGGTCTACC GCGAGGAAAT CTTCGGGCCG GTCCTGTGCG TGGTGCGCGT GCCGAACGTG
GCAGCAGCCG TCGAGCTTAT CAATGCCCAC GAGTACGGCA ACGGTGTGGC TGTGTTCACA
CGCGACGGCG GCGTGGCGCG CGAGTTCACG CGGCAGGTGC AGATTGGCAT GGTCGGTGTG
AATGTGCCGG TGCCGGTGCC GATGGCGTTC AACAGCTTCG GCGGCTGGAA GCGCAGCCTG
TTCGGCGACC ACCACATCTA CGGACCGGAG GGTGTGCGCT TCTACACGCG TCACAAGGCC
GTGATGCAAC GGTGGCCGGA CACCATCACC GCTGGCGCCG AGTTCGCGTT TCCTCAGCAT
AACTGA
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| Protein sequence | MTNLETISHF INGQRTASLR NAETQAVFNP ALGEAVAQVA MGSAEDIHAA VGAAAAAFPA
WSARPPLARA RILAKYLQLM QQHTDTLAQM LTREHGKTLD DARGEVARGL EVVEFAVGIP
HLLKGEFSDQ ISRGIDAWSI RQPLGVVAGI TPFNFPAMVP MWMFPIALAC GNTFVLKPSE
RDPSCSLLHA ELLKEAGLPD GVFNVVQGDK AVVDALLDHP EVQAVSFVGS TPIAEYVYAR
ASANGKRAQA LGGAKNHLVV MPDADMAMAT DALIGAAFGS AGERCMAISV AVAVGDVGDR
LVAALAERTR ALKIDDGTAP GAEMGPVITA AARERIESLI GAGVADGATL VVDGRDYRVP
GRESGFFVGG TLFDHVTPEM TVYREEIFGP VLCVVRVPNV AAAVELINAH EYGNGVAVFT
RDGGVAREFT RQVQIGMVGV NVPVPVPMAF NSFGGWKRSL FGDHHIYGPE GVRFYTRHKA
VMQRWPDTIT AGAEFAFPQH N
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