Gene Bphyt_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4244 
Symbol 
ID6277378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp289194 
End bp290252 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID642615340 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_001887993 
Protein GI187918962 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATC TTGCGGATAT CAAAATTAAC GTCGAAAAGG GCGAAGTGCC GGAGCTTTTC 
ACCGCGATGC GCAAATACTG GCACGCCGTC GCCTATTCGG GCCAGCTGAA GGACAAACCA
CTCGGTGTCA CGCTGTTGGG CGAGTCTGTG GTCATTGCGC GGCTCAATGG CGAAGTCCGC
GCGATGCATG GACGGTGTCC GCACAAAGGC ACGGCGCTCG CACTGGGTGA AGTCGTGGAT
GGCAAGATCG AATGCCCGTA CCACGGCTGG CAATTCGACG GCGGCGGAAA GTGCGTCCGG
GTTCCGGCGC GGGAAGAGCT GACCGAAGGC ATGAATGTCT CGATCGATTG CTACTACGCG
GCCGAGCATG TCGGGATCAT CTGGGTGGCA CTCGAAAAGC CGATCGCACC GCTGCCGGAT
TTCCCGGAAC TGAGCGATCC AAGCTTTCGC ATCCAGCAGG GACCGAGCTA CGAATGGGCG
ACCAGCGCGC CGCGCCGCCT CGAAAATTTC GTCGACTTCG CCCATTTTCC CTACGTGCAC
GACGGCACCA TCGGCGCCCG CGACAACCCC GCCGTGGAGA CGGTCAAGGT CTGGCGCGAA
GGCCACGTGT TGCGCTTCGA CCGTAGCGGC TATCTGCCGC CTAATCCCGA CCTTTACAAG
TTCCTGTTCC CCGTACGGGA AACGGATAGG GTGACGCCGG TCAACGCATA TCACATCTTC
TTGCCGGCGA CGGTGCACGC GAGTTTCCGC ATGCCGAACG ACAAGCGGTA CGTGCTTTTC
ATGAGCGCAT CGCCGGTTAC AGAGGACCTT ACTCGCATCT TCTGGTGGCA GGCGCGGGAC
TTCCGCACGG AGCCGATGGA GGATCGGTTC TTCATTGAAC TGGAAGACAC GATCCTCGGC
GAGGACAAGG CCATCATCGA GTCGCAGCGG CCGAAGTGGT TCAGCTTCAA CGGGGAAAAC
CGGGACGATC GCGAGACTCC GGTACGCGGC TCCGACATCG TTTCGATCGA GTACCGCCGG
TGGCTGTTCG AGAACTTCAC TGCCTCGCAG AAAAGCTGA
 
Protein sequence
MTNLADIKIN VEKGEVPELF TAMRKYWHAV AYSGQLKDKP LGVTLLGESV VIARLNGEVR 
AMHGRCPHKG TALALGEVVD GKIECPYHGW QFDGGGKCVR VPAREELTEG MNVSIDCYYA
AEHVGIIWVA LEKPIAPLPD FPELSDPSFR IQQGPSYEWA TSAPRRLENF VDFAHFPYVH
DGTIGARDNP AVETVKVWRE GHVLRFDRSG YLPPNPDLYK FLFPVRETDR VTPVNAYHIF
LPATVHASFR MPNDKRYVLF MSASPVTEDL TRIFWWQARD FRTEPMEDRF FIELEDTILG
EDKAIIESQR PKWFSFNGEN RDDRETPVRG SDIVSIEYRR WLFENFTASQ KS