| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4185 |
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| Symbol | |
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| ID | 6277622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 231521 |
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| End bp | 232549 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642615284 |
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| Product | Monosaccharide-transporting ATPase |
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| Protein accession | YP_001887937 |
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| Protein GI | 187918906 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000488874 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGC TCACCGCGAC TCCTTCCCGG CACGCCGTTC AGGCCGCTCG ATCCCCCGCG
TCCGTGCACG GCCCCGCAGC CGTGCGGGCA CTGCTGCGGC GTTACTCGCC GTTGCTCGTG
CTGATGGCGC TGGGCCTGTG CATCGGCGTG CTCAATCATG ACTTTTTCGA CCCGATGAAC
CTGTCGCGGA TCGCGATTGC CGCCGTGATT CCGTTGACGA TCGCGCTGGG CGGCACGTTC
GTGATTCAGC TCGGCAGCAT CGATCTGTCG GCGGAAGGAA TTGTCGCGGT GGCGGCGATC
GCCGTGTCGA TGCTGGTCGA GAACTCGTAC AACGACAACC ACTTCGGCCT GTGGGTGCTG
GCCATCGGCG TCGCGGCGGG CGTGGTGCTG GGGCTGGCCA ACGGCGTGTT GCACGTGTTT
CTGCGCATCC CGTCGTTCAT CACCACGCTC GCGGTCGGCT TCGTGGCGAC CGGGATCGGC
ACGGCCGTGC TGTCGGGCAA CACGATCCGC GTGAGCGACA CGGCGTTGCG CGCGATTTCG
ATCACGCGCT ACTTCGGTCT GCCGCTGTCG GTGTGGATCG GCGTGCTGGC GCTCGGGCTC
GCGTGGTTCG TGCACCGCCA TACGATTCTC GGCCGCCATA CGCTCGCGAT CGGCGGCGGT
GAGGATCTGG CGCGGCTGAG CGGCGTACGG ATCTCGCGCG TGCGCATAGC CGTGTTCGCG
CTTGCCGGCG CGTTCTACGG CGTGGCCGGC ATTCTCGCGG TCGCGCAGTA TGGGCAAGGT
CACGCAATGA TCGCCGACGG CCAACTGTTC GTCGCGATCA CCGCGATCGT GGTGGGCGGC
ACGTCGCTCG CGGGCGGCAA CGGTGGTCCG CTCAACACGC TGATCGGCAC GCTGGTGGTG
GTCGTGCTCG CCAACGGCAT GGTGTTGCTC GGCGTGCCGC CGTATGTGCA GCAGGGCATT
CAGGGCGTGC TGATCATCGT CGCCGTGACG CTGGCGCTGA ATCGCTCGCG CCGCCGTATC
GTCAAGTAA
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| Protein sequence | MNKLTATPSR HAVQAARSPA SVHGPAAVRA LLRRYSPLLV LMALGLCIGV LNHDFFDPMN
LSRIAIAAVI PLTIALGGTF VIQLGSIDLS AEGIVAVAAI AVSMLVENSY NDNHFGLWVL
AIGVAAGVVL GLANGVLHVF LRIPSFITTL AVGFVATGIG TAVLSGNTIR VSDTALRAIS
ITRYFGLPLS VWIGVLALGL AWFVHRHTIL GRHTLAIGGG EDLARLSGVR ISRVRIAVFA
LAGAFYGVAG ILAVAQYGQG HAMIADGQLF VAITAIVVGG TSLAGGNGGP LNTLIGTLVV
VVLANGMVLL GVPPYVQQGI QGVLIIVAVT LALNRSRRRI VK
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