| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4172 |
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| Symbol | |
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| ID | 6277529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 216418 |
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| End bp | 217356 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642615272 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001887925 |
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| Protein GI | 187918894 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000333211 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAAAA GAAAACTAAT CGGTGTCGTG GTCGGCGTTG GCGCTCTCAT TGGCGGGACG
AGCGTAACGT ACGCGGACAC CTACATCCCG CTCATTTCGA AGGGCTTCCA GCATCAATTC
TGGCAGGCCG TCAAATCCGG TGCCGAACAG TCGGCCAAGG AGCACAACGT CAGAATTACC
TTCGAGGGAC CGGAAACCGA AGCCATGGTC GACAAGCAGA TCGACATGCT CTCGGCCGCG
CTCGCCAAGA AGCCGCAGGC ACTCGGCATC GCCGCGCTCG ATAGCAAAGC GGCAATTCCA
CTGTTAAAGC GCGCACAGGC CTCGAAGATA CCCGTGATCG CTTTCGACTC CGGCGTGGAC
AGCGATATTC CGCTGACAAC GTGCGCAACG GATAACCTCG CCGCAGCCGC ACTCGCTGCC
GACAAGATGG CCGAGGCAAT CGGCAATGCC GGCGAAGTCG GCGTGATCGT GCACGACCAG
ACGAGCCGCA CCGGCATCGA TCGCCGCGAC GGCTTCCTCA ATGAAATGAA ATCCAAGCAC
CCGAACATCA AGATCGTCTC AGTCCAATAT GGCGGCGGCG ACCATTTGAA GTCGGCGGAA
ATCGCCAAGA CGATGATTCA GGCTAACCCG AATCTCAAGG GCATCTTCGG CGCGAATGAA
GGCTCGGCGG AAGGCGCCGC GATCGGCGTG AAGGAATCGG GCAAGAAGCT CGTGCTGATC
GGCTACGACT CGGGCAAGGA ACAGAAGGAC GATATCAACT CGGGATTGAT GGCCGGCGCG
ATTACGCAGA ACCCGGTTGG CATCGGCAAG TGCGTGGTCG ACTCCGCGGT GAAGGCGCTC
AAGGGCGAGA AGTTGCCGAA GAAAGTCGAC ACGGGCTTCT ACTGGTACGA CAAGACCAAC
ATGACCGATC CGAAGATCGC AGCCGTGCTC TACGATTGA
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| Protein sequence | MLKRKLIGVV VGVGALIGGT SVTYADTYIP LISKGFQHQF WQAVKSGAEQ SAKEHNVRIT
FEGPETEAMV DKQIDMLSAA LAKKPQALGI AALDSKAAIP LLKRAQASKI PVIAFDSGVD
SDIPLTTCAT DNLAAAALAA DKMAEAIGNA GEVGVIVHDQ TSRTGIDRRD GFLNEMKSKH
PNIKIVSVQY GGGDHLKSAE IAKTMIQANP NLKGIFGANE GSAEGAAIGV KESGKKLVLI
GYDSGKEQKD DINSGLMAGA ITQNPVGIGK CVVDSAVKAL KGEKLPKKVD TGFYWYDKTN
MTDPKIAAVL YD
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