Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4125 |
Symbol | |
ID | 6277539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 166985 |
End bp | 168571 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642615226 |
Product | hypothetical protein |
Protein accession | YP_001887879 |
Protein GI | 187918848 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGATAG CTATCCGAAA CGCGGCCCTC GGGTTGCTGG CATGTTGCAT TTTGGGCGCG TGTGCCGGTG CACCCGCAGA TTCACAATGC GGTGAAGCGT GCAATGGCCG CGGCCAGCTT CTCGATCATC GCGTCACGTT GAAGCTGAGC GCCACGGAGT TTGCGAAATT GCTGGCGTCG AGCGCAGGCG GCCGGCAACT CGTGCGAATA GCAGGCGCGC CCGCGTGCGG CGTCGAGATC GTGAGCTTTC GCTACCGGAC CATCGGCGGC GCGGGCGAGC CTACTCAGGC GAGCGGCGCG TTGATGATTC CGTCAGGAAG TTCGGCGACA TGCGGCGGAT CGCTGCCGCT CATGCTCTAT GCGCACGGCA CTACCGCGTA CCGCAACTAC AACCTCGCCG ATATCACACG AACGGACCCG GCCAACGGCG ACGGCGCCGG GGAAGGCATC AGCGTAGCGG CCATGTATGC GGCGCAAGGC TATATCGTGG TGGCGACCAA CTATGCGGGC TACGCCGGCT CCGATCTCCC TTACCACCCG TATCTCAATG CCGACCAGCA ATCCGCCGAT GTGATCGACT CGCTGCGCGC GGCACGTGCG GCGCTAGCCG ACATGAAAGC CGAAGCAGGC GCGCGCGAAA ACGGCAAGCT GTTCGTCACC GGCTATTCGC AAGGCGGCTT CGTGGCAATG GCGACGCATC GGGCGCTGCA AGCGGCCGGC GTCAAGGTGA CGGCGTCCGC GCCGGGCTCG GGGCCGTACG CACTTGCAGC CACCGCCGAC GCGCTTATCG AAGGCGAGGT CAACCTGGGC GCCACGCTCT TCTCGACGCT GATCGTGACG GGTTATCAGC ATGCCTACGG GAATATCTAC CGTCAGCCCG GCGACTTCTA TGAAGCGGCT TACGCTCCGG CTATCGAAAC GCTGCTGCCG AACTTGCAGC CGCTCGACAA GCTGTTCGGA ACGGGCAAAC TGCCGTCCGC GCATCTCTTC AACAGCGTGC CGCCCGCAAC GCAGTACGCC TCGATCACGC CGCCCGCGTC ACCGCCTTTG ACGCCGCCGC TCCTGAAACC GCTCTTTGCC GCGGGCTTCG GCGATGCCAA CCTCGTGCGC AACGCCTATC GCCTGACCTT GCTGGAGGAC GCCGCCGCCA ATCCCGATGG CGCGTTTCCC AACCCGACGC TTGCGATGAA ACCGGCAGCG AATCCGCTGC ATCCGTTGCG CCAGGCGTTC AAGCGCAACG ACTTGCGCAA CTGGGTGCCG CGTGCGCCCG TTCTGATGTG CGGCGGCGCG TCGGATCCCA CGGTGTTCTT TTTCAACGCG CGCGTCGAGC AGGCGTATTG GCAGAACGCC AACGTTCCCG CGGGGCTCAC GTCCGTGCTG GATGTGGACT CTCCTGTCGT CGGGCCCGGC GATCCGTATG CGCGCGTCAA GCGGGGTTTT GCAGGCGCGA AGGCAGAGGT CGCGAGTCAG GCCGTGGCCC GCGGTGCGAC CGACGGCGGC GCCTCAGCCG TGCTGCGGGC GTACCACGGT GAACTGGTCG CGTCGTTCTG CACGGTGGCG GCGCGGGCGT TTTTCGCCAA CTTTTGA
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Protein sequence | MWIAIRNAAL GLLACCILGA CAGAPADSQC GEACNGRGQL LDHRVTLKLS ATEFAKLLAS SAGGRQLVRI AGAPACGVEI VSFRYRTIGG AGEPTQASGA LMIPSGSSAT CGGSLPLMLY AHGTTAYRNY NLADITRTDP ANGDGAGEGI SVAAMYAAQG YIVVATNYAG YAGSDLPYHP YLNADQQSAD VIDSLRAARA ALADMKAEAG ARENGKLFVT GYSQGGFVAM ATHRALQAAG VKVTASAPGS GPYALAATAD ALIEGEVNLG ATLFSTLIVT GYQHAYGNIY RQPGDFYEAA YAPAIETLLP NLQPLDKLFG TGKLPSAHLF NSVPPATQYA SITPPASPPL TPPLLKPLFA AGFGDANLVR NAYRLTLLED AAANPDGAFP NPTLAMKPAA NPLHPLRQAF KRNDLRNWVP RAPVLMCGGA SDPTVFFFNA RVEQAYWQNA NVPAGLTSVL DVDSPVVGPG DPYARVKRGF AGAKAEVASQ AVARGATDGG ASAVLRAYHG ELVASFCTVA ARAFFANF
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