Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4103 |
Symbol | |
ID | 6278973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 143071 |
End bp | 143988 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615204 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_001887857 |
Protein GI | 187918826 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCAC CTCAAGAACT CAAAGCCATC GTTTCCGAAG GGCTGCTGTC CTTTCCCGTG ACCGACTTCG ACGCGCACGG CGAGTTTCGC GCCGACACCT ATGCTGCGCG CCTCGAATGG CTCGCGCCCT ACGGCGCGAC CGCGCTGTTC GCCGCGGGCG GCACGGGTGA ATTCTTCTCG TTGACGAAAA CCGACTACAC GAACGTGATC CGCACGGCGA CCGACACCTG CCGAGGCAAG GTGCCGATTC TCGCGGGCGC GGGCGGCCCG ACGCGCGTGG CGATCGAATA CGCGCAGGAA GCCGAACGTC TCGGCGCAAG CGGCGTGTTG CTGATGCCGC ATTATCTGAC CGAAGCGTCG CAGGAAGGCA TCGCGGCGCA CGTGGAGCAG GTGTGCAAGT CCGTGCCGAA CATTGGCGTG ATCGTCTACA ACCGCGCCAA TTCGAAGCTG AACGCGGACA TGCTCGAACG TCTCGCGGAC CGCTGCCCGA ATCTGATCGG CTTCAAGGAT GGCGTGGGTG AAATCGAAGC GATGGTGACG ATTCGCCGTC GGCTGGGCGA GCGTTTCTCG TATCTCGGCG GCCTGCCGAC CGCGGAAGTC TATGCGGCGG CGTATAAGGC GCTGGGTGTG CCGGTATATT CATCGGCGGT GTTCAACTTC ATTCCGAAGA CGGCGATGGA GTTTTATCGC GCGGTCGCCG CCAATGATCA CGCAACGCAA GGCAGGCTGC TCGACGAATT CTTCCTGCCG TATCTGGCGA TCCGGAATCG TCGCGCGGGT TACGCGGTGA GCATCGTGAA GGCGGGCGCG AAACTGGTGG GCCACGACGC CGGTCCGGTC CGCGCACCGC TGACCGATTT GACCGATGAA GAGTCGGCGC AACTCGACGC GCTGATTAGA AAGCTCGGCG CGCAGTAA
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Protein sequence | MTSPQELKAI VSEGLLSFPV TDFDAHGEFR ADTYAARLEW LAPYGATALF AAGGTGEFFS LTKTDYTNVI RTATDTCRGK VPILAGAGGP TRVAIEYAQE AERLGASGVL LMPHYLTEAS QEGIAAHVEQ VCKSVPNIGV IVYNRANSKL NADMLERLAD RCPNLIGFKD GVGEIEAMVT IRRRLGERFS YLGGLPTAEV YAAAYKALGV PVYSSAVFNF IPKTAMEFYR AVAANDHATQ GRLLDEFFLP YLAIRNRRAG YAVSIVKAGA KLVGHDAGPV RAPLTDLTDE ESAQLDALIR KLGAQ
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