| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4031 |
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| Symbol | |
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| ID | 6280192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 45686 |
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| End bp | 47119 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642615134 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001887787 |
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| Protein GI | 187918756 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.636683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGTG TGCAGAGCCA ACGTCGGCCA GTGAATTGGC AAAGCCGGCC TTTTTGCGCG
GATGCCCGTT CAAAGCGTCG TATGGCAAAG CGCGACTTCC CGGCGGGATT CGTGCCGTTC
GGGTTGCAGA CCGCCGGCTT CATCGTACGA GGCCCGAAAC AATTGTGGCC GTATGTTTTG
CCGTGGGTGT TCGCGGTGCT CACCATAGGT TTTTTCTGCC TCGTCGTGCG CGGCGTACTC
ACGCGGCAAT TGCTGGTGCC GCCCGTCGAA ACGCCGCAGT CGCTGGTGGA ACGCGGTTAT
ACATCGAATT TTCTCGCGGA ACGCATCATG TCTTCTATGC GAGCGATCGG TCAGGACGCC
GAGTCGATTC CGCACGACAC CCTGACGGAC AACGACGCAC AACCGGACAT TCAGATCCCC
GGTCAGGAGA TGTCGTATGC AACCACCGTG CGCTTCATTA AAGGCGTCAT CAAACGCACG
GACGTGGCCG TTCATGTCGG CATCACGAAG GTTAACGACA GCGCGGACTC CTATGTGGCG
CATGTGCAGA TTGAAGGCGG TCCGTTTAAT TCCCGCGAAA GCACGGTGTC GTTCGAAGGA
CGCGATCTGG AAAAGTTCGT GCACGACATT GCAGTCAAAG CCATGCGTCT TGCGGAGCCG
AATATTCTCG CCAGTCATCT CTACTCGCAA GTGCAGAAAA CCAAGTGTTC CCTCGCGCAC
TGCGACTACG GCGAGATCGT CGCGATCTAC GACGAAGTGC TCGCACTGCC CGCCTCTGAG
CAAGGCGAAT GGGCGCTCGC CGGCAAAGCG TGGCTGCTTG CCAATCAGGG GCTGTCCAAA
GAGGCCGAGC AGCAGACTCG CGAAGCGTTG ACCGTGTACC AGCATTCAGC GGTGCTGCAC
GCAAGCCTTG GCATTGCACT CGAACAGCAG CATCGCATCG ACGACGCACT CGATGCCTTG
CGAGCCGGCG CACGCGAGAA ATCGAAGACG GCGGAAAATC TGCGTCTTCT CGGCGACGTG
CTATTGCATG CGAATCGCTA TTCCGAAGCG CTCGATGCAT TCAAGCAGGC CGACAAGATG
AAGCCCGACT CGGTCGACAA CCTGCACGAT TGGGGCGAAG CGCTCGTCAC CGTCGGCCGC
TATGACGAAG CAATCGAAAA GCTCTCGCGC GCCGTCGCGC TACGCCCGGA TCTCGCGCCC
TCTTACGCGG AATGGGGCCG GGCACTGGAT CGCAAAGGCG ATCGGTCCGG CGCCTCGCGC
AAATTCGCTC AGGCGTTGCA ACTCGATGCG GGGACTTTGT CGGTGCGCGA GAGTCATCTG
GCGCGGCTTG CCAGAGCGGC GCAGGGAGGC AACCGCCCAG ACGCGTCGAA GCCCGATGAC
GGAGTCAGGC CCGTTTCGAA TCCACCCGCC CCGCTTGCGT TGCAAACCGC GTAA
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| Protein sequence | MSSVQSQRRP VNWQSRPFCA DARSKRRMAK RDFPAGFVPF GLQTAGFIVR GPKQLWPYVL
PWVFAVLTIG FFCLVVRGVL TRQLLVPPVE TPQSLVERGY TSNFLAERIM SSMRAIGQDA
ESIPHDTLTD NDAQPDIQIP GQEMSYATTV RFIKGVIKRT DVAVHVGITK VNDSADSYVA
HVQIEGGPFN SRESTVSFEG RDLEKFVHDI AVKAMRLAEP NILASHLYSQ VQKTKCSLAH
CDYGEIVAIY DEVLALPASE QGEWALAGKA WLLANQGLSK EAEQQTREAL TVYQHSAVLH
ASLGIALEQQ HRIDDALDAL RAGAREKSKT AENLRLLGDV LLHANRYSEA LDAFKQADKM
KPDSVDNLHD WGEALVTVGR YDEAIEKLSR AVALRPDLAP SYAEWGRALD RKGDRSGASR
KFAQALQLDA GTLSVRESHL ARLARAAQGG NRPDASKPDD GVRPVSNPPA PLALQTA
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