| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0188 |
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| Symbol | |
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| ID | 6273539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 128634 |
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| End bp | 128894 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641728826 |
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| Product | Spa9 |
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| Protein accession | YP_001883217 |
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| Protein GI | 187734394 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4794] Type III secretory pathway, component EscS |
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| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
| Num covering plasmid clones | 151 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTGATA TAGTTTATAT GGGTAATAAG GCTCTTTATT TAATCCTTAT CTTTTCCTTA
TGGCCAGTAG GTATAGCTAC GGTTATTGGA TTAACTATTG GTTTATTACA GACAGTGACT
CAACTTCAAG AGCAGACACT TCCTTTTGGT ATAAAGCTTA TAGGTGTCTC AATATCTTTG
CTACTTCTTT CTGGATGGTA TGGTGAGGTT TTATTGTCTT TTTGTCATGA AATAATGTTT
TTAATTAAGA GTGGGGTTTG A
|
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| Protein sequence | MSDIVYMGNK ALYLILIFSL WPVGIATVIG LTIGLLQTVT QLQEQTLPFG IKLIGVSISL
LLLSGWYGEV LLSFCHEIMF LIKSGV
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