| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0187 |
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| Symbol | spaP |
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| ID | 6273586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 127969 |
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| End bp | 128619 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641728825 |
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| Product | surface presentation of antigens protein SpaP |
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| Protein accession | YP_001883216 |
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| Protein GI | 187734451 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 143 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAGTG ATATGTCCCT CATCGCTACA CTTTCTTTTT TTACGCTATT ACCATTTTTA
GTTGCTGCTG GTACTTGTTA TATAAAGTTT TCTATTGTTT TTGTAATGGT ACGAAATGCA
CTTGGTTTGC AGCAGGTTCC ATCAAATATG ACTCTCAATG GTATTGCATT GATTATGGCT
TTGTTCGTGA TGAAACCCAT TATTGAAGCT GGTTATGAAA ATTATCTAAA TGGCCCGCAA
AAATTTGATA CAATATCAGA TATTGTCCGT TTTTCTGATT CTGGCTTGAT TGAATACAAG
CAATACTTGA AAAAGCATAC AGATCTTGAG TTGGCACGTT TTTTCCAAAG GTCTGAAGAA
GAAAATGCTG ATTTAAAGAG TGCAGAGAAT AATGATTATT CATTGTTTTC CCTCTTGCCT
GCATATGCGC TAAGTGAAAT TAAAGATGCG TTCAAAATAG GTTTTTATTT ATATTTGCCA
TTTATTGTTG TTGATCTTGT TATTTCAAGC ATTTTACTTG CACTTGGTAT GATGATGATG
AGTCCAATCA CAATATCAGT ACCAATAAAA CTTGTATTAT TTGTTGCGCT TGATGGGTGG
GGGATCCTGT CTAAGGCCTT GATTGAACAA TATATCAATG TTCCTGCTTA G
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| Protein sequence | MLSDMSLIAT LSFFTLLPFL VAAGTCYIKF SIVFVMVRNA LGLQQVPSNM TLNGIALIMA
LFVMKPIIEA GYENYLNGPQ KFDTISDIVR FSDSGLIEYK QYLKKHTDLE LARFFQRSEE
ENADLKSAEN NDYSLFSLLP AYALSEIKDA FKIGFYLYLP FIVVDLVISS ILLALGMMMM
SPITISVPIK LVLFVALDGW GILSKALIEQ YINVPA
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