Gene SbBS512_A0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0183 
Symbol 
ID6273514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp124501 
End bp125793 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content39% 
IMG OID641728821 
ProductATP synthase SpaL 
Protein accessionYP_001883212 
Protein GI187734342 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family 


Plasmid Coverage information

Num covering plasmid clones121 
Plasmid unclonability p-value0.998687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATA TAAAATTGCT CACTCAATTA TCTTTTCCTA ATAGAATCTC GGGGCCAATC 
TTGGAAACAA GTCTTAGTGA TGTTTCGATT GGTGAGATTT GTAACATTCA GGCTGGAATT
GAAAGTAATG AAATTATTGC AAGAGCTCAG GTTGTAGGAT TTCATGATGA AAAAACAATA
TTAAGCTTGA TTGGAAATTC TCGTGGACTT TCACGGCAAA CGTTGATTAA GCCCACTGCC
CAGTTTCTTC ATACGCAAGT CGGCCGTGGA TTATTGGGAG CAGTAGTCAA TCCTTTAGGG
GAGGTTACTG ATAAGTTTGC TGTTACGGAT AACAGTGAAA TTCTTTATCG ACCTGTAGAT
AATGCTCCTC CGCTATATAG TGAAAGGGCT GCAATTGAGA AGCCTTTTTT AACAGGTGTT
AAGGTTATTG ATTCTTTACT CACGTGTGGT GAAGGACAGC GAATGGGGAT TTTTGCGTCA
GCTGGTTGTG GCAAAACTTT TCTCATGAAT ATGCTCATTG AACATAGTAG TGCTGATATA
TATGTTATTG GGTTAATTGG TGAGCGAGGT CGAGAGGTTA CAGAAACGGT TGATTATTTG
AAAAACTCTG AGAAAAAAAG CAGGTGTGTT TTAGTATATG CAACTTCGGA TTACTCTTCG
GTTGATCGTT GTAATGCTGC ATATATAGCC ACTGCTATAG CCGAATTTTT TAGGACTGAA
GGACATAAAG TAGCGCTTTT TATTGATTCA TTAACAAGGT ATGCCAGAGC ATTACGTGAT
GTGGCCTTAG CCGCTGGAGA ATCACCTGCC AGAAGAGGCT ATCCGGTTTC GGTTTTTGAT
AGCTTACCCA GACTTCTTGA AAGGCCAGGA AAGTTAAAGG CAGGTGGCTC TATTACTGCA
TTTTACACTG TTCTTTTGGA GGATGATGAT TTTGCTGATC CATTAGCTGA AGAGGTAAGA
TCCATTTTAG ATGGACATAT ATATTTGAGC AGAAATCTAG CCCAAAAAGG ACAATTTCCT
GCAATTGATT CCTTAAAAAG TATAAGCAGG GTATTTACAC AGGTTGTTGA TGAAAAACAT
CGTATTATGG CCGCTGCATT TCGGGAGCTA CTTTCTGAAA TAGAAGAGCT AAGGACAATT
ATTGACTTTG GTGAATACAA ACCGGGGGAG AATGCCTCTC AGGATAAAAT CTACAACAAA
ATATCTGTTG TTGAGAGTTT TCTGAAGCAA GATTATCGAC TCGGTTTTAC TTATGAGCAG
ACAATGGAGC TTATTGGTGA AACAATTAGA TAA
 
Protein sequence
MSYIKLLTQL SFPNRISGPI LETSLSDVSI GEICNIQAGI ESNEIIARAQ VVGFHDEKTI 
LSLIGNSRGL SRQTLIKPTA QFLHTQVGRG LLGAVVNPLG EVTDKFAVTD NSEILYRPVD
NAPPLYSERA AIEKPFLTGV KVIDSLLTCG EGQRMGIFAS AGCGKTFLMN MLIEHSSADI
YVIGLIGERG REVTETVDYL KNSEKKSRCV LVYATSDYSS VDRCNAAYIA TAIAEFFRTE
GHKVALFIDS LTRYARALRD VALAAGESPA RRGYPVSVFD SLPRLLERPG KLKAGGSITA
FYTVLLEDDD FADPLAEEVR SILDGHIYLS RNLAQKGQFP AIDSLKSISR VFTQVVDEKH
RIMAAAFREL LSEIEELRTI IDFGEYKPGE NASQDKIYNK ISVVESFLKQ DYRLGFTYEQ
TMELIGETIR