Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_A0183 |
Symbol | |
ID | 6273514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010660 |
Strand | + |
Start bp | 124501 |
End bp | 125793 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641728821 |
Product | ATP synthase SpaL |
Protein accession | YP_001883212 |
Protein GI | 187734342 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
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Plasmid Coverage information |
Num covering plasmid clones | 121 |
Plasmid unclonability p-value | 0.998687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATA TAAAATTGCT CACTCAATTA TCTTTTCCTA ATAGAATCTC GGGGCCAATC TTGGAAACAA GTCTTAGTGA TGTTTCGATT GGTGAGATTT GTAACATTCA GGCTGGAATT GAAAGTAATG AAATTATTGC AAGAGCTCAG GTTGTAGGAT TTCATGATGA AAAAACAATA TTAAGCTTGA TTGGAAATTC TCGTGGACTT TCACGGCAAA CGTTGATTAA GCCCACTGCC CAGTTTCTTC ATACGCAAGT CGGCCGTGGA TTATTGGGAG CAGTAGTCAA TCCTTTAGGG GAGGTTACTG ATAAGTTTGC TGTTACGGAT AACAGTGAAA TTCTTTATCG ACCTGTAGAT AATGCTCCTC CGCTATATAG TGAAAGGGCT GCAATTGAGA AGCCTTTTTT AACAGGTGTT AAGGTTATTG ATTCTTTACT CACGTGTGGT GAAGGACAGC GAATGGGGAT TTTTGCGTCA GCTGGTTGTG GCAAAACTTT TCTCATGAAT ATGCTCATTG AACATAGTAG TGCTGATATA TATGTTATTG GGTTAATTGG TGAGCGAGGT CGAGAGGTTA CAGAAACGGT TGATTATTTG AAAAACTCTG AGAAAAAAAG CAGGTGTGTT TTAGTATATG CAACTTCGGA TTACTCTTCG GTTGATCGTT GTAATGCTGC ATATATAGCC ACTGCTATAG CCGAATTTTT TAGGACTGAA GGACATAAAG TAGCGCTTTT TATTGATTCA TTAACAAGGT ATGCCAGAGC ATTACGTGAT GTGGCCTTAG CCGCTGGAGA ATCACCTGCC AGAAGAGGCT ATCCGGTTTC GGTTTTTGAT AGCTTACCCA GACTTCTTGA AAGGCCAGGA AAGTTAAAGG CAGGTGGCTC TATTACTGCA TTTTACACTG TTCTTTTGGA GGATGATGAT TTTGCTGATC CATTAGCTGA AGAGGTAAGA TCCATTTTAG ATGGACATAT ATATTTGAGC AGAAATCTAG CCCAAAAAGG ACAATTTCCT GCAATTGATT CCTTAAAAAG TATAAGCAGG GTATTTACAC AGGTTGTTGA TGAAAAACAT CGTATTATGG CCGCTGCATT TCGGGAGCTA CTTTCTGAAA TAGAAGAGCT AAGGACAATT ATTGACTTTG GTGAATACAA ACCGGGGGAG AATGCCTCTC AGGATAAAAT CTACAACAAA ATATCTGTTG TTGAGAGTTT TCTGAAGCAA GATTATCGAC TCGGTTTTAC TTATGAGCAG ACAATGGAGC TTATTGGTGA AACAATTAGA TAA
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Protein sequence | MSYIKLLTQL SFPNRISGPI LETSLSDVSI GEICNIQAGI ESNEIIARAQ VVGFHDEKTI LSLIGNSRGL SRQTLIKPTA QFLHTQVGRG LLGAVVNPLG EVTDKFAVTD NSEILYRPVD NAPPLYSERA AIEKPFLTGV KVIDSLLTCG EGQRMGIFAS AGCGKTFLMN MLIEHSSADI YVIGLIGERG REVTETVDYL KNSEKKSRCV LVYATSDYSS VDRCNAAYIA TAIAEFFRTE GHKVALFIDS LTRYARALRD VALAAGESPA RRGYPVSVFD SLPRLLERPG KLKAGGSITA FYTVLLEDDD FADPLAEEVR SILDGHIYLS RNLAQKGQFP AIDSLKSISR VFTQVVDEKH RIMAAAFREL LSEIEELRTI IDFGEYKPGE NASQDKIYNK ISVVESFLKQ DYRLGFTYEQ TMELIGETIR
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