| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0087 |
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| Symbol | |
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| ID | 6273472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 53892 |
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| End bp | 55619 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641728738 |
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| Product | IpaH1.4 |
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| Protein accession | YP_001883129 |
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| Protein GI | 187734415 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 87 |
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| Plasmid unclonability p-value | 0.00799741 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAT CAACCAATAT ACAGGCAATC GGTTCTGGTA TTATGCATCA AATAAACAAT
ATATACTCGT TAACTCCATT TCCTTTACCT ATGGAACTGA CTCCATCTTG TAATGAATTT
TATTTAAAAG CCTGGAGTGA ATGGGAAAGG AACGGTACCC CAGGCGAGCA ACGCAATATC
GCCTTCAATA GGCTGAAAAT ATGTTTACAA AATCAAGAGG CAGAATTAAA TTTATCTGAG
TTAGATTTAA AAACATTACC AGATTTACCG CCTCAGATAA CAACACTGGA AATAAGAAAA
AACCTATTAA CACATCTCCC TGATTTACCA CCAATGCTTA AGGTAATACA TGCTCAATTT
AATCAACTGG AAAGCTTACC TGCCTTACCC GAGACGTTAG AAGAGCTTAA TGCGGGTGAT
AACAAGATAA AAGAATTACC ATTTCTTCCT GAAAATCTAA CTCATTTACG GGTTCATAAT
AACCGATTGC ATATTCTGCC ACTATTGCCA CCGGAACTAA AATTACTGGT AGTTTCTGGA
AACAGATTAG ACAGCATTCC CCCCTTTCCA GATAAGCTTG AAGGGCTGGC TCTGGCTAAT
AATTTTATAG AACAACTACC GGAATTACCT TTTAGTATGA ACAGGGCTGT GCTAATGAAT
AATAATCTGA CAACACTTCC GGAAAGTGTC CTGAGATTAG CTCAGAATGC CTTCGTAAAT
GTTGCAGGTA ATCCACTGTC TGGCCATACC ATGCGTACAC TACAACAAAT AACCACCGGA
CCAGATTATT CTGGTCCTCG AATATTTTTC TCTATGGGAA GTTCTGCCAC AATTTCCGCT
CCAGAACACT CCCTGGCTGA TGCCGTGACA GCATGGTTCC CGGAAAACAA ACAATCTGAT
GTATCACAGA TATGGCATGC TTTTGAACAT GAAGAGCATG CCAACACCTT TTCCGCGTTC
CTTGACCGCC TTTCCGATAC CGTCTCTGCA CGCAATACCT CCGGATTCCG TGAACAGGTC
GCTGCATGGC TGGAAAAACT CAGTGCCTCT GCGGAGCTTC GACAGCAGTC TTTCGCTGTT
GCTGCTGATG CCACTGAGAG CTGTGAGGAC CGTGTCGCGC TCACATGGAA CAATCTCCGG
AAAACCCTCC TGGTCCATCA GGCATCAGAA GGCCTTTTCG ATAATGATAC CGGCGCTCTG
CTCTCCCTGG GCAGGGAAAT GTTCCGCCTC GAAATTCTGG AGGACATTGC CCGGGATAAA
GTCAGAACTC TCCATTTTGT GGATGAGATA GAAGTCTACC TGGCCTTCCA GACCATGCTC
GCAGAGAAAC TTCAGCTCTC CACTGCCGTG AAGGAAATGC GTTTCTATGG CGTGTCGGGA
GTGACAGCAA ATGACCTCCG CACTGCCGAA GCCATGGTCA GAAGCCGTGA AGAGAATGAA
TTTAAGGACT GGTTCTCCCT CTGGGGACCA TGGCATGCTG TACTGAAGCG TACGGAAGCT
GACCGCTGGG CGCAGGCAGA AGAGCAGAAG TATGAGATGC TGGAGAATGA GTACTCTCAG
AGGGTGGCTG ACCGGCTGAA AGCATCAGGT CTGAGCGGTG ATACGGATGC GGAGAGGGAA
GCCGGTGCAC AGGTGATGCG TGAGACTGAA CAGCAGATTT ACCGTCAGTT GACTGACGAG
GTACTGGCCC TGCGATTGTC TGAAAACGGC TCAAATCATA TCGCATAA
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| Protein sequence | MIKSTNIQAI GSGIMHQINN IYSLTPFPLP MELTPSCNEF YLKAWSEWER NGTPGEQRNI
AFNRLKICLQ NQEAELNLSE LDLKTLPDLP PQITTLEIRK NLLTHLPDLP PMLKVIHAQF
NQLESLPALP ETLEELNAGD NKIKELPFLP ENLTHLRVHN NRLHILPLLP PELKLLVVSG
NRLDSIPPFP DKLEGLALAN NFIEQLPELP FSMNRAVLMN NNLTTLPESV LRLAQNAFVN
VAGNPLSGHT MRTLQQITTG PDYSGPRIFF SMGSSATISA PEHSLADAVT AWFPENKQSD
VSQIWHAFEH EEHANTFSAF LDRLSDTVSA RNTSGFREQV AAWLEKLSAS AELRQQSFAV
AADATESCED RVALTWNNLR KTLLVHQASE GLFDNDTGAL LSLGREMFRL EILEDIARDK
VRTLHFVDEI EVYLAFQTML AEKLQLSTAV KEMRFYGVSG VTANDLRTAE AMVRSREENE
FKDWFSLWGP WHAVLKRTEA DRWAQAEEQK YEMLENEYSQ RVADRLKASG LSGDTDAERE
AGAQVMRETE QQIYRQLTDE VLALRLSENG SNHIA
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