| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4741 |
|---|
| Symbol | |
|---|
| ID | 6270318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4424067 |
|---|
| End bp | 4426142 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641728500 |
|---|
| Product | pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001882895 |
|---|
| Protein GI | 187733297 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.429912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGC TTGATGACAC CATCCTTGAT GCGCTGACGC ACGTTACTTT CCCAAAGGGT
TTTGCACAGG CAGAGCCCGC ATGGGTTGTC ACGGTAGACG GTGTTAATTA CCCACTCTGG
CAAACAGATG CCCTGGTAGT CGGCAGTGGT GCAGCAAGAT TACGTGCGGC AGTTGAACTT
AAACGCCGCC AGCAAAATGT GCTGATCGCT ACCGCCGGGT TATATATGGG GACGTCGGCA
TGTTCTGGTT CCGATAAACA GACACTATTT ACCGCCGCTA CCGCGGGCAA CGGCGACAAC
TTCACCAAAC TGGCAGAGGC ACTGGCGAGC GGTGGGGCGA TGGATCACGA CACCGCTTAT
GTCGAAGCGG TAGGTTCTCT GCACACTCTA GGCGGGTTGC AATATCTTGG TCTGGAATTA
CCGGAAGATC GCTATGGCGC GATTCTTCGT TATCAAACCG ACCATGACGA AGCCGGGCGT
GCAACCTCGT GTGGGCCGCG TACCTCAAGG TTAATGGTGA AAGTGCTGTT GGAAGAAGTA
CAGCGCCTCG CCATTCCAGT GTTGACCAGT GCAACAGTGA TTAAACTGCT GCATCAGCGT
GACGAAAACG GCGAAGACCG CGTGGCAGGG GCAATCCTCG CGACCGGTCA TCGCGCCCAT
AACCCATGGG GGCTGGCAAT TGTGACTGCG CCCAATGTGG TACTGGCAAC GGGCGGACCG
GGCGAGCTTT ATCGCGACAG TGTTTATCCA CATAAATGCT TCGGCTCGCT GGGGCTGGCG
CTGGAGGAAG GTCTGACGCT AACCAATCTG ACCGAAAGCC AGTTTGGTAT AGGCACGCCG
CGTAGCACGT TTCCGTGGAA TTTATCCGGC ACCTATGTAC AGGTGATCCC GTATATCTAT
TCCGTGGATG CTGAGGGTAA CGAGTATAAC TTCCTCGCGG ATTACTATCG CACCACCCAG
GAGCTGGCTT CAAACATTTT CCGTAAAGGC TATCAGTGGC CGTTCCACGC CACTCGGGTG
ATGGATTTTG GCTCCAGCTT GTTAGATATG GCAGTAGCGC AAGAGCAGCA ATCAGGGCGT
CAGGTATTTA TGGATTTCAA TCGCAATCCT GAAGCGGTGC CGGGTGACCT GCCGTTCTCA
TTAGATCGAC TGGACGACGA CGTTCGCGCG TATCTGGAAA ATAACGACGC TCTGGCACCA
TCGCCCATCG AACGGCTGCA ACGAATGAAT CCGCTGTCTA TCTCGCTGTA TAAGATGCAC
GGTTACGATC TCACCACACA GCCTTTGCAG TTTGCCATGA ATAATCAGCA TATGAATGGC
TGCATTGAAG TGGATATCTG GGGACAAACC TCCCTGCCCG GCTGTTTCGC CGTGGGGGAA
GTTGCTGGCA CACACGGCGT CACTCGCCCA GGTGGTGCAG CATTGAATGC CGGGCAGGTT
TTTGCTGTTC GTCTGGCACG TTTTATTGGT TGCACGCAAA AGCGGTCTGT TGAGGGTGAT
GTCGCGCAGC TGGTAGCCTC ATCTCTGAAT ATAGTCAGAG AAGTTATCGC TCAGGCACTG
GCAAACGAGA ACGGAATGGC GCTGGTAACG GTGAAAGACA AAATCCAGGC GCGAATGTCT
GATTACGCCG GATTTATTTG TCATGCCGAT AAAGTTCGTC ATGCCACCCG TGACGCCCTG
CTGCTAAGTG AGTTTGTACA ACAACACGGT TTAACCATCA ATCACGCAGG CGAAATTGCC
GAACTGTTTA TGTGGCGGCA TATGACGCTG ACTTCTGCCG CCGTATTAAC GCAATTGACG
CATTATATTG ACGCAGGTGG AGGCAGTCGT GGAGCACGGA TGGTTATTGA TCCACAAGGC
AAATGCCTCC CACAAACTCG TCGCGGCGCA AAAGAAGAAT GGCGTTTTCG CTCTGAACGT
GCTGAAGACA AAAATCACAG ATTAACGATT CAATATTCGC AAGGTTCTTT TATTACCGAA
GTGAAGTCTT TACGTATGCA ACCGTGTATT AACGGTATTT ACTTTGAAAA AAACTGGCCA
GACTTTTTAG GTAATGCTGC CAACTTACTG ATTTAG
|
|---|
| Protein sequence | MSQLDDTILD ALTHVTFPKG FAQAEPAWVV TVDGVNYPLW QTDALVVGSG AARLRAAVEL
KRRQQNVLIA TAGLYMGTSA CSGSDKQTLF TAATAGNGDN FTKLAEALAS GGAMDHDTAY
VEAVGSLHTL GGLQYLGLEL PEDRYGAILR YQTDHDEAGR ATSCGPRTSR LMVKVLLEEV
QRLAIPVLTS ATVIKLLHQR DENGEDRVAG AILATGHRAH NPWGLAIVTA PNVVLATGGP
GELYRDSVYP HKCFGSLGLA LEEGLTLTNL TESQFGIGTP RSTFPWNLSG TYVQVIPYIY
SVDAEGNEYN FLADYYRTTQ ELASNIFRKG YQWPFHATRV MDFGSSLLDM AVAQEQQSGR
QVFMDFNRNP EAVPGDLPFS LDRLDDDVRA YLENNDALAP SPIERLQRMN PLSISLYKMH
GYDLTTQPLQ FAMNNQHMNG CIEVDIWGQT SLPGCFAVGE VAGTHGVTRP GGAALNAGQV
FAVRLARFIG CTQKRSVEGD VAQLVASSLN IVREVIAQAL ANENGMALVT VKDKIQARMS
DYAGFICHAD KVRHATRDAL LLSEFVQQHG LTINHAGEIA ELFMWRHMTL TSAAVLTQLT
HYIDAGGGSR GARMVIDPQG KCLPQTRRGA KEEWRFRSER AEDKNHRLTI QYSQGSFITE
VKSLRMQPCI NGIYFEKNWP DFLGNAANLL I
|
|---|
| |