| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4662 |
|---|
| Symbol | |
|---|
| ID | 6273120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4357834 |
|---|
| End bp | 4358838 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641728427 |
|---|
| Product | site-specific recombinase, phage integrase family protein |
|---|
| Protein accession | YP_001882825 |
|---|
| Protein GI | 187733889 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA CTGACGCAAA AATCCGGGCT GCAAAGCCCA CTGACAAGGC TTATAAACTC
ACTGACGGGG CTGGCATGTT CCTGCTGGTA CATCCTAATG GCTCCCGTTA CTGGCGTCTC
CGTTATCGTA TTCTGGGTAA GGAGAAGACT CTGGCACTTG GTGTGTATCC AGAAGTTTCT
CTCTCCGAAG CTCGTACAAA ACGGGATGAG GCCCGAAAAC TGATTTCGGA GGGGGTTGAC
CCTTGCGAAC AGAAAAGAGC TAAAAAAGTA GTCCCTGATT TACAGCTCTC TTTTGAACAT
ATTGCGCGAC GCTGGCATGC CAGTAATAAA CAATGGGCAC AATCACACAG CGATAAAGTA
CTCAAAAGCC TCGAGACTCA CGTTTTCCCC TTTATCGGCA ACCGGGATAT CACAACACTC
AATACCCCGG ATCTGCTTAT CCCTGTTCGT GCTACAGAAG CTAAACAAAT TTATGAAATC
GCCAGTCGTC TGCAGCAAAG AATATCTGCC GTAATGCGTT ATGCCGTACA GTCTGGCATC
ATCAGATATA ATCCTGCTCT GGATATGGCT GGCGCATTGA CTACGGTAAA ACGCCAGCAT
CGCCCCGCTC TTGATCTTTC TCGCCTGCCT GAACTTTTGT CGCGTATTGG CAGTTACAAA
GGGCAACCTG TCACCCAGCT TGCCGTTATG CTGAATTTAC TGGTTTTTAT TCGTTCCAGT
GAACTCAGAT ACGCCCGCTG GTCTGAAATT GATATTGACA ATGCCATGTG GACTATTCCA
GCCGAACGCG AACCCCTGCC AGGCGTAAAA TTCTCACACC GGGGCTCCAA GATGCGAACA
CCACATCTTG TGCCACTCAG CAAACAGGCT GTAGCCATAC TGACAGAACT ACAGACATGG
GCTGGTGAAA ATGGTCTGAT CTTTACGGGA GCACATGACC CGCGTAAACC AATCAGTGAA
AATGTAATGA ACGCATCTCA CACAATTAAA CACGGAGCAG TATGA
|
|---|
| Protein sequence | MALTDAKIRA AKPTDKAYKL TDGAGMFLLV HPNGSRYWRL RYRILGKEKT LALGVYPEVS
LSEARTKRDE ARKLISEGVD PCEQKRAKKV VPDLQLSFEH IARRWHASNK QWAQSHSDKV
LKSLETHVFP FIGNRDITTL NTPDLLIPVR ATEAKQIYEI ASRLQQRISA VMRYAVQSGI
IRYNPALDMA GALTTVKRQH RPALDLSRLP ELLSRIGSYK GQPVTQLAVM LNLLVFIRSS
ELRYARWSEI DIDNAMWTIP AEREPLPGVK FSHRGSKMRT PHLVPLSKQA VAILTELQTW
AGENGLIFTG AHDPRKPISE NVMNASHTIK HGAV
|
|---|
| |