| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4650 |
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| Symbol | |
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| ID | 6272089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4343979 |
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| End bp | 4347836 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641728417 |
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| Product | serine protease EatA |
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| Protein accession | YP_001882815 |
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| Protein GI | 187733690 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TTTATTCACT GAAATATAGT CATATTACAG GTGGATTAGT TGCTGTTTCT
GAACTGACCC GGAAAGTTAG TGTCGGTACA TCAAGAAAGA AAGTTATCCT CGGTATTATT
TTATCCTCAA TATATGGAAG TTATGGCGAA ACAGCATTTG CAGCAATGCT GGATATAAAT
AATATATGGA CCCGCGATTA TCTTGACCTT GCTCAAAACA GAGGAGAGTT CAGACCGGGT
GCAACAAATG TTCAATTAAT GATGAAAGAT GGAAAGATAT TTCATTTTCC AGAACTACCT
GTACCTGATT TTTCTGCTGT TTCCAACAAA GGTGCAACAA CATCAATTGG AGGTGCGTAC
AGTGTTACTG CGACTCATAA CGGTACACAG CATCATGCAA TAAAAACACA GTCATGGGAT
CAGACAGCAT ATAAAGCAAG TAACAGAGTA TCATCTGGCG ACTTTTCGGT TCATCGTCTG
AATAAATTCG TCGTGGAAAC AACAGGGGTT ACGGAGAGTG CCGACTTCTC ACTTTCTCCC
GAAGATGCGA TGAAAAGATA TGGCGTAAAC TACAACGGTA AGGAACAAAT AATTGGCTTC
AGAGCAGGTG CCGGAACAAC CTCAACGATA TTAAACGGCA AACAATATCT GTTTGGACAA
AACTATAATC CCGACTTGTT AAGCGCAAGT CTTTTTAATC TGGACTGGAA AAACAAGAGT
TACATTTATA CCAACAGAAC CCCTTTTAAA AACTCACCAA TTTTTGGCGA TAGTGGTTCT
GGTTCTTATC TATATGATAA AGAACAACAA AAATGGGTTT TCCATGGTGT TACCAGTACA
GTTGGTTTTA TCAGTAGTAC CAATATAGCC TGGACAAACT ACTCGTTATT TAATAATATT
CTGGTAAACA ATTTAAAAAA GAATTTCACA AACACTATGC AGCTGGATGG TAAAAAACAA
GAGTTATCAT CGATTATAAA AGATAAGGAC CTGTCTGTCT CAGGAGGAGG GGAATTAACG
CTCAAGCAGG ATACCGATCT TGGCATTGGC GGGCTTATAT TCGATAAGAA CCAGACATAT
AAAGTGTACG GAAAAGATAA GTCTTATAAA GGTGCCGGGA TAGATATTGA TAATAATACC
ACCGTTGAAT GGAATGTTAA GGGCGTTGCC GGAGATAATC TGCATAAAAT AGGTAGTGGT
ACTCTGGATG TAAAAATAGC ACAGGGAAAT AACCTTAAAA TAGGTAATGG GACTGTCATC
CTTAGTGCTG AAAAAGCCTT CAATAAAATT TACATGGCCG GAGGTAAAGG TACGGTAAAA
ATAAATGCCA AAGACGCTTT AAGCGAAAGC GGTAATGGCG AAATCTATTT TACCAGAAAT
GGCGGAACAC TGGATCTAAA CGGCTATGAC CAGTCATTTC AGAAAATCGC AGCAACAGAT
GCGGGAACAA CCGTAACGAA CTCAAACGTG AAGCAATCAA CATTATCACT TACTAATACT
GATGCATATA TGTACCATGG GAATGTATCA GGTAATATAA GCATAAATCA TATTATCAAT
ACTACCCAGC AACATAACAA TAATGCCAAT CTGATCTTTG ATGGCTCAGT CGATATCAAA
AACGATATCT CTGTCCGGAA TGCACAGTTA ACATTACAAG GACATGCGAC AGAACATGCC
ATATTTAAAG AAGGCAATAA CAACTGTCCA ATTCCTTTTT TATGTCAAAA AGATTATTCT
GCTGCCATAA AGGACCAGGA AAGCACTGTA AATAAACGTT ACAATACGGA ATATAAGTCC
AACAATCAGA TAGCCTCTTT TTCCCAGCCC GACTGGGAAA GTCGTAAATT TAATTTCCGG
AAATTAAATT TAGAAAACGC AACCCTGAGT ATAGGCCGGG ATGCTAATGT AAAAGGACAC
ATAGAGGCTA AAAACTCTCA AATTGTTCTG GGAAATAAAA CTGCATACAT TGACATGTTC
TCAGGAAGAA ACATTACTGG CGAAGGTTTT GGATTCAGAC AACAGCTTCG CTCCGGGGAT
TCAGCAGGCG AAAGTAGTTT CAACGGCAGT CTGAGTGCTC AAAACAGCAA AATAACTGTT
GGTGATAAAT CAACTGTTAC TATGACTGGT GCATTATCCT TAATTAATAC AGACCTGATT
ATCAACAAAG GAGCTACTGT TACCGCCCAG GGAAAAATGT ATGTAGATAA AGCTATTGAA
CTGGCCGGAA CCCTGACATT AACAGGCACC CCTACAGAAA ATAATAAATA CAGCCCGGCA
ATCTATATGT CAGATGGATA TAATATGACA GAAGATGGTG CCACGTTAAA GGCTCAAAAT
TATGCCTGGG TCAATGGTAA TATAAAATCA GACAAAAAAG CATCTATTCT GTTTGGTGTT
GACCAGTATA AAGAAGATAA CCTGGACAAA ACCACACACA CACCGCTGGC TACAGGTTTG
CTGGGTGGCT TTGATACTTC TTATACCGGA GGTATTGATG CTCCTGCTGC CTCAGCCAGC
ATGTATAACA CCTTATGGAG AGTAAACGGA CAGTCAGCCC TGCAATCATT AAAAACCCGC
GACAGTCTTT TGTTGTTTAG TAACATAGAG AATTCGGGTT TCCATACTGT GACTGTAAAC
ACACTGGATG CCACTAATAC TGCTGTGATT ATGCGGGCTG ATCTGAGCCA GTCTGTAAAT
CAATCGGATA AACTCATTGT TAAAAATCAG TTAACCGGAC GCAATAACAG TCTGTCGGTC
GATATACAGA AAGTGGGAAA TAATAACTCA GGATTAAACG TTGACCTGAT AACAGCCCCA
AAAGGAAGCA ATAAAGAGAT ATTTAAAGCC AGTACTCAGG CCATAGGTTT CAGCAACATA
TCTCCTGTGA TCAGCACGAA AGAGGATCAG GAACATACCA CGTGGACCCT GACCGGATAT
AAGGTGGCTG AAAATACAGC ATCTTCCAGT GCAGCAAAAT CGTATATGTC CGGTAATTAC
AAAGCCTTCC TGACAGAAGT CAACAACCTG AATAAACGAA TGGGGGATCT GCGTGACACC
AATGGCGAGG CCGGTGCATG GGCCCGCATC ATGAGCGGAG CAGGTTCAGC TTCTGGTGGA
TACAGTGACA ACTACACCCA TGTGCAGATT GGTGTGGATA AAAAACATGA GCTGGATGGA
CTTGACCTTT TCACTGGTCT GACTATGACG TATACCGACA GTCATGCCAG CAGTAATGCA
TTCAGTGGCA AGACGAAGTC CGTCGGGGCA GGTCTGTATG CTTCCGCTAT ATTTGACTCT
GGTGCCTATA TCGACCTGAT TAGTAAGTAT GTTCACCATG ATAATGAGTA CTCGGCGACC
TTTGCTGGGC TCGGAACAAA AGACTACAGT TCTCATTCCT TGTATGTGGG TGCTGAAGCA
GGCTACCGCT ATCATGTAAC AGAAGACTCC TGGATTGAGC CGCAGGCAGA ACTGGTTTAT
GGGGCCGTAT CAGGTAAACG GTTCGACTGG CAGGATCGCG GAATGAGCGT GACCATGAAG
GATAAGGACT TTAATCCGCT GATTGGGCGT ACCGGTGTTG ATGTGGGTAA ATCCTTCTCC
GGTAAGGACT GGAAAGTCAC AGCCCGCGCC GGCCTTGGCT ACCAGTTTGA CCTGTTTGCC
AACGGTGAAA CCGTACTGCG TGATGCGTCC GGTGAGAAAC GTATCAAAGG TGAAAAAGAC
GGTCGTATTC TCATGAATGT TGGTCTCAAC GCCGAAATTC GCGATAATCT TCGCTTCGGT
CTTGAGTTTG AGAAATCGGC ATTTGGTAAA TACAACGTGG ATAACGCGAT CAACGCCAAC
TTCCGTTACT CTTTCTGA
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| Protein sequence | MNKIYSLKYS HITGGLVAVS ELTRKVSVGT SRKKVILGII LSSIYGSYGE TAFAAMLDIN
NIWTRDYLDL AQNRGEFRPG ATNVQLMMKD GKIFHFPELP VPDFSAVSNK GATTSIGGAY
SVTATHNGTQ HHAIKTQSWD QTAYKASNRV SSGDFSVHRL NKFVVETTGV TESADFSLSP
EDAMKRYGVN YNGKEQIIGF RAGAGTTSTI LNGKQYLFGQ NYNPDLLSAS LFNLDWKNKS
YIYTNRTPFK NSPIFGDSGS GSYLYDKEQQ KWVFHGVTST VGFISSTNIA WTNYSLFNNI
LVNNLKKNFT NTMQLDGKKQ ELSSIIKDKD LSVSGGGELT LKQDTDLGIG GLIFDKNQTY
KVYGKDKSYK GAGIDIDNNT TVEWNVKGVA GDNLHKIGSG TLDVKIAQGN NLKIGNGTVI
LSAEKAFNKI YMAGGKGTVK INAKDALSES GNGEIYFTRN GGTLDLNGYD QSFQKIAATD
AGTTVTNSNV KQSTLSLTNT DAYMYHGNVS GNISINHIIN TTQQHNNNAN LIFDGSVDIK
NDISVRNAQL TLQGHATEHA IFKEGNNNCP IPFLCQKDYS AAIKDQESTV NKRYNTEYKS
NNQIASFSQP DWESRKFNFR KLNLENATLS IGRDANVKGH IEAKNSQIVL GNKTAYIDMF
SGRNITGEGF GFRQQLRSGD SAGESSFNGS LSAQNSKITV GDKSTVTMTG ALSLINTDLI
INKGATVTAQ GKMYVDKAIE LAGTLTLTGT PTENNKYSPA IYMSDGYNMT EDGATLKAQN
YAWVNGNIKS DKKASILFGV DQYKEDNLDK TTHTPLATGL LGGFDTSYTG GIDAPAASAS
MYNTLWRVNG QSALQSLKTR DSLLLFSNIE NSGFHTVTVN TLDATNTAVI MRADLSQSVN
QSDKLIVKNQ LTGRNNSLSV DIQKVGNNNS GLNVDLITAP KGSNKEIFKA STQAIGFSNI
SPVISTKEDQ EHTTWTLTGY KVAENTASSS AAKSYMSGNY KAFLTEVNNL NKRMGDLRDT
NGEAGAWARI MSGAGSASGG YSDNYTHVQI GVDKKHELDG LDLFTGLTMT YTDSHASSNA
FSGKTKSVGA GLYASAIFDS GAYIDLISKY VHHDNEYSAT FAGLGTKDYS SHSLYVGAEA
GYRYHVTEDS WIEPQAELVY GAVSGKRFDW QDRGMSVTMK DKDFNPLIGR TGVDVGKSFS
GKDWKVTARA GLGYQFDLFA NGETVLRDAS GEKRIKGEKD GRILMNVGLN AEIRDNLRFG
LEFEKSAFGK YNVDNAINAN FRYSF
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