Gene SbBS512_E4635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4635 
Symbol 
ID6273256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4332185 
End bp4333378 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content57% 
IMG OID641728404 
ProductShiF protein 
Protein accessionYP_001882802 
Protein GI187732469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCAG GGATCGAAGA TACGCCCCAA AAAACACTGT CCTGCTGGCC ACTTGCGTTC 
AGTGCCGGGC TTCTCGGTAT CGGACAGAAC GGTCTGCTGG TTGTGCTCCC TGTTCTGGTC
ATACAGACAA ATCTGAGTCT GTCTGTATGG GCTGCCCTGC TGATGCTTGG CTCAATGCTG
TTTCTGCCAT CGTCCCCGTG GTGGGGAAAG CAAATTTCCC GTACTGGCAG TAAACCTGTG
GTGTTGTGGG CTCTGGGAGG ATATGGCATA AGCTTTACCC TGCTAGGGCT GGGAAGCGTG
CTGATGGCTA CCAGCGCCAT AACAACAGCG GTGGGACTGG GAATATTAAT CATCGCCCGG
ATCGCCTACG GGCTGACCGT GTCGGCAATG GTGCCAGCCT GTCAGGTCTG GGCATTGCAG
AGAGCTGGAG AAGGGAATCG CATGGCCGCT CTGGCAACCA TCAGCTCCGG CCTGAGTTGC
GGCAGGCTAT TCGGGCCGCT GTGCGCGGCA GCAATGCTGG CCATTCATCC TCTGGCGCCA
CTGGGGCTAC TGATGGCAGC ACCAGTGCTG GCGCTGCTGA TGCTGCTGCG GTTGCCCGGC
ACACCACCAC AGCCCACACC GGAGTGCAAG AGCGTCAGTC TGAAGCGGGA TTGTCTGCCT
TATCTGCTTT GCGCAATATT ACTGGCTGCG GCGGTGAGCA TGATGCAGCT TGGACTTTCG
CCTGCCCTTA CTCGCCAGTT CGTCACGGAT ACCACCGCCA TTAGCCAACA GGTGGCCTGG
CTGTTGGGTC TGTCCGCAGT AGCTGCGCTT ATCGCGCAGT TCGGGGTAGT CCGTCCGCAG
CGCCTGACTC CGGTGGCCCT GCTCCTGAGT GCCGGAGTGT TGATGAGTGG TGGTCTGGCT
ATCATGCTCT CCGAACAGCT ATGGTTGTTT TACCCGGGCT GTGCAGTGCT GTCATTTGGA
GCAGCTCTGG CAACACCCGC TTATCAACTT CTACTGAATG ATAAGCTGGC TGATGGCGCA
GGCGCGGGCT GGCTCGCTAC CAGTCACACA CTTGGCTATG GACTGTGCGC TTTGCTGGTG
CCGCTGGTAT CGAAAACAGG TGTCGCAATC GCGCTGATTA TGGCAGCATT ATTTGCAACT
ATATTATTTA CCATTGTGTC TGTATTTATC TGGCATTACC GTACTATCAA ATAA
 
Protein sequence
MSPGIEDTPQ KTLSCWPLAF SAGLLGIGQN GLLVVLPVLV IQTNLSLSVW AALLMLGSML 
FLPSSPWWGK QISRTGSKPV VLWALGGYGI SFTLLGLGSV LMATSAITTA VGLGILIIAR
IAYGLTVSAM VPACQVWALQ RAGEGNRMAA LATISSGLSC GRLFGPLCAA AMLAIHPLAP
LGLLMAAPVL ALLMLLRLPG TPPQPTPECK SVSLKRDCLP YLLCAILLAA AVSMMQLGLS
PALTRQFVTD TTAISQQVAW LLGLSAVAAL IAQFGVVRPQ RLTPVALLLS AGVLMSGGLA
IMLSEQLWLF YPGCAVLSFG AALATPAYQL LLNDKLADGA GAGWLATSHT LGYGLCALLV
PLVSKTGVAI ALIMAALFAT ILFTIVSVFI WHYRTIK